BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZH04FM1.SCF screened BAC_end (921 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1556 1090 0.0 3x_Contig1589 440 e-123 >3x_Contig1556 Length = 10874 Score = 1090 bits (550), Expect = 0.0 Identities = 550/550 (100%) Strand = Plus / Plus Query: 87 caaatttcaatataattattagtaaactacttctacataccgttttttaatcatttcatc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10317 caaatttcaatataattattagtaaactacttctacataccgttttttaatcatttcatc 10376 Query: 147 ctttcgtcatattatcacaggctatttttgagcactaagatccccatcgtctctgcaatg 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10377 ctttcgtcatattatcacaggctatttttgagcactaagatccccatcgtctctgcaatg 10436 Query: 207 tatgttttgcctttgtctgtcttccctcattattttatgcagatttgattatgagaattt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10437 tatgttttgcctttgtctgtcttccctcattattttatgcagatttgattatgagaattt 10496 Query: 267 caacataaataaagatttgaaatatgtaaacaaaagacctgatgagatcaacaaaacaaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10497 caacataaataaagatttgaaatatgtaaacaaaagacctgatgagatcaacaaaacaaa 10556 Query: 327 cacaaaggcgagtcaaaaaagtgaatccaaccctgtcaacgcttgctgtgaggttacata 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10557 cacaaaggcgagtcaaaaaagtgaatccaaccctgtcaacgcttgctgtgaggttacata 10616 Query: 387 tctgctgctttagataacccggtgatatcacaatgaaagtggaagaacttatcatcgatg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10617 tctgctgctttagataacccggtgatatcacaatgaaagtggaagaacttatcatcgatg 10676 Query: 447 ggttcaagtcatacgccacaagaactgtcattacagattgggatcctcaattcaacgcca 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10677 ggttcaagtcatacgccacaagaactgtcattacagattgggatcctcaattcaacgcca 10736 Query: 507 tcactggtttaaacgggtcaggtaaatcgaatattttagatgcgatatgttttgtgttgg 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10737 tcactggtttaaacgggtcaggtaaatcgaatattttagatgcgatatgttttgtgttgg 10796 Query: 567 gtatttcatcaatggcaaccgttcgtgctcaaaatttacaggatttgatctacaagagag 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10797 gtatttcatcaatggcaaccgttcgtgctcaaaatttacaggatttgatctacaagagag 10856 Query: 627 gtcaggctgg 636 |||||||||| Sbjct: 10857 gtcaggctgg 10866 >3x_Contig1589 Length = 10239 Score = 440 bits (222), Expect = e-123 Identities = 254/262 (96%), Gaps = 2/262 (0%) Strand = Plus / Minus Query: 650 agtgttaccatcgtatttaataatagcgataccagtaattcaccaattggatttgaatcg 709 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10239 agtgttaccatcgtatttaataatagcgataccagtaattcaccaattggatttgaatcg 10180 Query: 710 catgcgaaaatctcaatcactagacaaatcatactcggcggagtcagtaaatatctgatc 769 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10179 catgcgaaaatctcaatcactagacaaatcatactcggcggagtcagtaaatatctgatc 10120 Query: 770 aatggtcatagggcccagcaacaaaccgtgcttcagttgtttcaatcggtgcaattgaat 829 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10119 aatggtcatagggcccagcaacaaaccgtgcttcagttgtttcaatcggtgcaattgaat 10060 Query: 830 attatatacccgaactttttgatcatgctaagtaaaatttaccaaggttttg-acattaa 888 |||| ||||||||||||||||||||| | |||||| |||||||||||||| |||| || Sbjct: 10059 attaataacccgaactttttgatcatgcaaggtaaaa-ttaccaaggttttgaacatgaa 10001 Query: 889 gccgcaggagattctttcgtta 910 |||||||||||||||||||||| Sbjct: 10000 gccgcaggagattctttcgtta 9979 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6860 Number of Sequences: 1807 Number of extensions: 6860 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 2 length of query: 921 length of database: 10,358,551 effective HSP length: 16 effective length of query: 905 effective length of database: 10,329,639 effective search space: 9348323295 effective search space used: 9348323295 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)