BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZH06FM1.SCF screened BAC_end (937 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1786 1443 0.0 >3x_Contig1786 Length = 33838 Score = 1443 bits (728), Expect = 0.0 Identities = 829/852 (97%), Gaps = 8/852 (0%) Strand = Plus / Minus Query: 87 taaatttggtccatagaaaatcaaacaaatctaagataatcttttttaatcatcatgtat 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24298 taaatttggtccatagaaaatcaaacaaatctaagataatcttttttaatcatcatgtat 24239 Query: 147 tatcaatatttagtctccattttcataatactaactttgtaggttcttgtcctttttacg 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24238 tatcaatatttagtctccattttcataatactaactttgtaggttcttgtcctttttacg 24179 Query: 207 tgatgttacattttggatgctgtataattcggatttgggtttattccttttttttttttg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24178 tgatgttacattttggatgctgtataattcggatttgggtttattccttttttttttttg 24119 Query: 267 ttacttcttgtagtactttcttttagctcaaaag-tg-tatataaagag-gttaaggttg 323 |||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||| Sbjct: 24118 ttacttcttgtagtactttcttttagctcaaaagctgctatataaagagcgttaaggttg 24059 Query: 324 actcaagaattttttggaggataatg-attcctagtagttgtgttattggtagaagtttt 382 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 24058 actcaagaattttttggaggataatgcattcctagtagttgtgttattggtagaagtttt 23999 Query: 383 ggttataatttgatacatcaaaacatatcaagcaagctcagaggtatattcaaacattat 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23998 ggttataatttgatacatcaaaacatatcaagcaagctcagaggtatattcaaacattat 23939 Query: 443 actaaaagttctactgctaatacaataaaaattacaaacacaaacacgatttccaacatg 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23938 actaaaagttctactgctaatacaataaaaattacaaacacaaacacgatttccaacatg 23879 Query: 503 agtccagcttccgatagattaaagcaaacttcctcgattctttctaagtccgttgaacct 562 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 23878 agtccagcttccgatagattaaagcaaacttcctcgattctttctaagtccgtggaacct 23819 Query: 563 caagccgatgcacctttcaaggttacagttgtcggttctggtaactggggtactactatc 622 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23818 caagccgatgcacctttcaaggttacagttgtcggttctggtaactggggtactactatc 23759 Query: 623 gccaaggttgttgctgaaaactgtgctttgagacctaacctatttgtcaacagagttgat 682 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23758 gccaaggttgttgctgaaaactgtgctttgagacctaacctatttgtcaacagagttgat 23699 Query: 683 atgtgggttttcgaagaaaacattaacggtgaaaagttgactgaaatcattaacactcgt 742 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 23698 atgtgggttttcgaagaaaacattaacggtgaaaagttgactgaaatcatcaacactcgt 23639 Query: 743 tacgaaaacgttcaatatttgccaggtattaagctttcaagtaatttgtttgctaaccca 802 |||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 23638 cacgaaaacgtcaaatatttgccaggtattaagcttccaagtaatttggttgctaaccca 23579 Query: 803 gacttggtcgatgctgctaaggacgcttatttccttggctttaacattccctcat-aatt 861 ||||||||||||||||||||||||||| || |||||| |||||||||| |||||| |||| Sbjct: 23578 gacttggtcgatgctgctaaggacgctgatatccttgtctttaacatt-cctcatcaatt 23520 Query: 862 cttgccaagattctgttctc-acttaagggtaacgtgaagactcaggctcgtgctttctt 920 |||||||||| ||||||||| ||| ||||||||||||||| |||||||||||||| || | Sbjct: 23519 cttgccaagaatctgttctcaactaaagggtaacgtgaagcctcaggctcgtgctatc-t 23461 Query: 921 tttgtttgaagg 932 ||||||||||| Sbjct: 23460 cttgtttgaagg 23449 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,957 Number of Sequences: 1807 Number of extensions: 13957 Number of successful extensions: 145 Number of sequences better than 1.0e-20: 1 length of query: 937 length of database: 10,358,551 effective HSP length: 16 effective length of query: 921 effective length of database: 10,329,639 effective search space: 9513597519 effective search space used: 9513597519 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)