BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC13ZH06FM1.SCF screened BAC_end
         (937 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1786                                                        1443   0.0  

>3x_Contig1786 
          Length = 33838

 Score = 1443 bits (728), Expect = 0.0
 Identities = 829/852 (97%), Gaps = 8/852 (0%)
 Strand = Plus / Minus

                                                                         
Query: 87    taaatttggtccatagaaaatcaaacaaatctaagataatcttttttaatcatcatgtat 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24298 taaatttggtccatagaaaatcaaacaaatctaagataatcttttttaatcatcatgtat 24239

                                                                         
Query: 147   tatcaatatttagtctccattttcataatactaactttgtaggttcttgtcctttttacg 206
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24238 tatcaatatttagtctccattttcataatactaactttgtaggttcttgtcctttttacg 24179

                                                                         
Query: 207   tgatgttacattttggatgctgtataattcggatttgggtttattccttttttttttttg 266
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24178 tgatgttacattttggatgctgtataattcggatttgggtttattccttttttttttttg 24119

                                                                         
Query: 267   ttacttcttgtagtactttcttttagctcaaaag-tg-tatataaagag-gttaaggttg 323
             |||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||
Sbjct: 24118 ttacttcttgtagtactttcttttagctcaaaagctgctatataaagagcgttaaggttg 24059

                                                                         
Query: 324   actcaagaattttttggaggataatg-attcctagtagttgtgttattggtagaagtttt 382
             |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 24058 actcaagaattttttggaggataatgcattcctagtagttgtgttattggtagaagtttt 23999

                                                                         
Query: 383   ggttataatttgatacatcaaaacatatcaagcaagctcagaggtatattcaaacattat 442
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23998 ggttataatttgatacatcaaaacatatcaagcaagctcagaggtatattcaaacattat 23939

                                                                         
Query: 443   actaaaagttctactgctaatacaataaaaattacaaacacaaacacgatttccaacatg 502
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23938 actaaaagttctactgctaatacaataaaaattacaaacacaaacacgatttccaacatg 23879

                                                                         
Query: 503   agtccagcttccgatagattaaagcaaacttcctcgattctttctaagtccgttgaacct 562
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 23878 agtccagcttccgatagattaaagcaaacttcctcgattctttctaagtccgtggaacct 23819

                                                                         
Query: 563   caagccgatgcacctttcaaggttacagttgtcggttctggtaactggggtactactatc 622
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23818 caagccgatgcacctttcaaggttacagttgtcggttctggtaactggggtactactatc 23759

                                                                         
Query: 623   gccaaggttgttgctgaaaactgtgctttgagacctaacctatttgtcaacagagttgat 682
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23758 gccaaggttgttgctgaaaactgtgctttgagacctaacctatttgtcaacagagttgat 23699

                                                                         
Query: 683   atgtgggttttcgaagaaaacattaacggtgaaaagttgactgaaatcattaacactcgt 742
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 23698 atgtgggttttcgaagaaaacattaacggtgaaaagttgactgaaatcatcaacactcgt 23639

                                                                         
Query: 743   tacgaaaacgttcaatatttgccaggtattaagctttcaagtaatttgtttgctaaccca 802
              ||||||||||  ||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 23638 cacgaaaacgtcaaatatttgccaggtattaagcttccaagtaatttggttgctaaccca 23579

                                                                         
Query: 803   gacttggtcgatgctgctaaggacgcttatttccttggctttaacattccctcat-aatt 861
             ||||||||||||||||||||||||||| || |||||| |||||||||| |||||| ||||
Sbjct: 23578 gacttggtcgatgctgctaaggacgctgatatccttgtctttaacatt-cctcatcaatt 23520

                                                                         
Query: 862   cttgccaagattctgttctc-acttaagggtaacgtgaagactcaggctcgtgctttctt 920
             |||||||||| ||||||||| ||| ||||||||||||||| |||||||||||||| || |
Sbjct: 23519 cttgccaagaatctgttctcaactaaagggtaacgtgaagcctcaggctcgtgctatc-t 23461

                         
Query: 921   tttgtttgaagg 932
              |||||||||||
Sbjct: 23460 cttgtttgaagg 23449


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,957
Number of Sequences: 1807
Number of extensions: 13957
Number of successful extensions: 145
Number of sequences better than 1.0e-20: 1
length of query: 937
length of database: 10,358,551
effective HSP length: 16
effective length of query: 921
effective length of database: 10,329,639
effective search space: 9513597519
effective search space used: 9513597519
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)