BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC13ZH10FM1.SCF screened BAC_end
         (918 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1319                                                        1554   0.0  

>3x_Contig1319 
          Length = 7600

 Score = 1554 bits (784), Expect = 0.0
 Identities = 824/832 (99%), Gaps = 4/832 (0%)
 Strand = Plus / Plus

                                                                        
Query: 88   taccgattcttatattggtgttaatcggttggttttgttcgttccccttctttctagtta 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1553 taccgattcttatattggtgttaatcggttggttttgttcgttccccttctttctagtta 1612

                                                                        
Query: 148  tataagtttgaagtcaattctatcgtctcatagagaagatctctcactattccttacgtg 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1613 tataagtttgaagtcaattctatcgtctcatagagaagatctctcactattccttacgtg 1672

                                                                        
Query: 208  tttctaccactttatatcgttcttagcttctttgtaaaagcaaatcaaccaagaaactca 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1673 tttctaccactttatatcgttcttagcttctttgtaaaagcaaatcaaccaagaaactca 1732

                                                                        
Query: 268  tgtgatacacagaattttgtaaacactagctcctttcaatgggacaaagttcgatgcttt 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1733 tgtgatacacagaattttgtaaacactagctcctttcaatgggacaaagttcgatgcttt 1792

                                                                        
Query: 328  gaggtttcattaacttctcatcagtttactcttccaggttcattgtttaccaattaaact 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1793 gaggtttcattaacttctcatcagtttactcttccaggttcattgtttaccaattaaact 1852

                                                                        
Query: 388  aattgggtaattatctatcatgtgacttgtttgatcatgtgacttgaaaagcaagaggtt 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1853 aattgggtaattatctatcatgtgacttgtttgatcatgtgacttgaaaagcaagaggtt 1912

                                                                        
Query: 448  tacttgggacctttcttgtagtcccttgagaaaacatggtgtcaatg-gctgcctcaacc 506
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1913 tacttgggacctttcttgtagtcccttgagaaaacatggtgtcaatgtgctgcctcaacc 1972

                                                                        
Query: 507  ctcaa-gaaatgatgttggatcgtagtaagtgttctttggtagctcatgctcttgttttt 565
            ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1973 ctcaatgaaatgatgtttgatcgtagtaagtgttctttggtagctcatgctcttgttttt 2032

                                                                        
Query: 566  tctatgtgtggtctgcttccttaacgaatctttgagtttaaatatagcagatcatcatga 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2033 tctatgtgtggtctgcttccttaacgaatctttgagtttaaatatagcagatcatcatga 2092

                                                                        
Query: 626  aaagttatgtatggctcactacgtaaatcgaagaagagccaacccgaaatcccctgtaag 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 2093 aaagttatgtatggctcactacgtaaatcgaagaagagccaacccgaaatcccctgtaa- 2151

                                                                        
Query: 686  gacgagaccataggcaactgtagacaacatgctgttactattgatggtacttttctcttt 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2152 gacgagaccataggcaactgtagacaacatgctgttactattgatggtacttttctcttt 2211

                                                                        
Query: 746  ggcatgtgctttcgaaagtataagaggtgtaccaccagagaatcagtcactatactcgcc 805
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2212 ggcatgtgcttccgaaagtataagaggtgtaccaccagagaatcagtcactatactcgcc 2271

                                                                        
Query: 806  cttaccagaggatccaaacaaatggagatgcctagatgatacagcaaaagtgataccgta 865
            |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2272 cttaccagaggatccaacaaaatggagatgcctagatgatacagcaaaagtgataccgta 2331

                                                                
Query: 866  cagctctataaatgataatttgtgtgactgcttcggattgctctgatgaacc 917
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2332 cagctctataaatgataatttgtgtgactgc-tcggattgctctgatgaacc 2382


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6062
Number of Sequences: 1807
Number of extensions: 6062
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)