BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZH10RM1.SCF screened BAC_end (922 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1656 1606 0.0 >3x_Contig1656 Length = 14482 Score = 1606 bits (810), Expect = 0.0 Identities = 853/865 (98%), Gaps = 2/865 (0%) Strand = Plus / Minus Query: 52 gcttttaagaaatcgcctgcagcttattgaattgaagaatcgtgttcaattgataaataa 111 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2231 gcttttaagaaatcgcctgcagcagattgaattgaagaatcgtgttcaattgataaataa 2172 Query: 112 tctaacaatttagatatcaaatgttgtttcttcaataatgcgattattccagttggagca 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2171 tctaacaatttagatatcaaatgttgtttcttcaataatgcgattattccagttggagca 2112 Query: 172 tctggtttatccgtagaaatgactttaagaaggaaatccatcaatggagggttattgttg 231 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 2111 tctggtttatccgtagaaatgactttaagaaggaaatccatcaatggagggttatcgatg 2052 Query: 232 tgtgcaataaatctatcaactatattctcttgttttaaaatgaagtttatcatgccacta 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2051 tgtgcaataaatctatcaactatattctcttgttttaaaatgaagtttatcatgccacta 1992 Query: 292 atgtccatatctaataaacgttcattgattttcatgaaatatgtggatgcaatgattgaa 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1991 atgtccatatctaataaacgttcattgattttcatgaaatatgtggatgcaatgattgaa 1932 Query: 352 agtggagcagggtgttccaaagtggaccataacttgactagaaggtcttcgttatccatg 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1931 agtggagcagggtgttccaaagtggaccataacttgactagaaggtcttcgttatccatg 1872 Query: 412 aatgcagaggaaatggtccacacatccgcagagagaatctctgcagcgatcctggctctt 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1871 aatgcagaggaaatggtccacacatccgcagagagaatctctgcagcgatcctggctctt 1812 Query: 472 cttgactctacctgttcttcactttctggtggtagagtgatactcgtttcagctgaagac 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1811 cttgactctacctgttcttcactttctggtggtagagtgatactcgtttcagctgaagac 1752 Query: 532 tcagatgcattatctggaacgacgtccagtgtattttggtattgtgattgagtattattt 591 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1751 tcagatgcattatctggaacgacgtccagtgtattttggtattgtgattgagtattattt 1692 Query: 592 tcatcttctgaattctctaagtcatcccctgaatccgcttctgcctctggagaaccttgt 651 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1691 tcatcttctgaattctctaagtcatcccctgaatccgcttctgcctctggagaaccttgt 1632 Query: 652 ttaccctgatcttcctctgcatcgttatcggatgaatccgacccattttccccttcttgt 711 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1631 ttaccctgatcttcctctgcatcgttatcggatgaatccgacccattttccccttcttgt 1572 Query: 712 tgttcctcatcgaccatgctatcgtcagctggttctaatacgtgttcgttggtcacataa 771 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1571 tgttcctcatcgaccatgctatcgtcagctggttctaatacgtgttcgttggtcacataa 1512 Query: 772 tcaaccaaccttgctaacacttcaggataccntgaaaacaccaatagttttgaaattcga 831 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 1511 tcaaccaaccttgctaacacttcaggatacctgaaaaacaccaatag-tttgaaattcga 1453 Query: 832 gcacataagctctgtatacagttcctcgtcatccaacaagtcgttctaaatatcaaggtt 891 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1452 gcacataagctctgtatacagttcctcgtcatccaacaagtcgtctaaaatatcaaggtt 1393 Query: 892 gggacgatagtcctttgtattcgaa 916 ||||||||||||| ||||||||||| Sbjct: 1392 gggacgatagtcc-ttgtattcgaa 1369 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7119 Number of Sequences: 1807 Number of extensions: 7119 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 922 length of database: 10,358,551 effective HSP length: 16 effective length of query: 906 effective length of database: 10,329,639 effective search space: 9358652934 effective search space used: 9358652934 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)