BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZA01RM1.SCF screened BAC_end (909 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1654 1618 0.0 >3x_Contig1654 Length = 17174 Score = 1618 bits (816), Expect = 0.0 Identities = 848/856 (99%), Gaps = 2/856 (0%) Strand = Plus / Minus Query: 52 gctttaatgacccgcttctgtcaactgtatagtacaaccacacaaaaccagaatatattt 111 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8675 gctttaatgacccgcttctgtcaactgtatagtacaaccacacaaaaccagaatatattt 8616 Query: 112 atatatatatatatatctaattaattccttcattggattccaagttgttctcgcaacctt 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8615 atatatatatatatatctaattaattccttcattggattccaagttgttctcgcaacctt 8556 Query: 172 tgattctctagttgcaacatattgatgcggttcgttgctgcttcagactccttttttctt 231 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 8555 tgattctctagttgcaacatattgatgcggttcgttgctgcttcagactccagttttctt 8496 Query: 232 ctttcacgttcaccaatccattttttccttaattcgtcaattttcagcttggattgtttc 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8495 ctttcacgttcaccaatccattttttccttaattcgtcaattttcagcttggattgtttc 8436 Query: 292 tctacctcatcattctgtgatgagccggaccattcttctttttcgttcagaagcagatcg 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8435 tctacctcatcattctgtgatgagccggaccattcttctttttcgttcagaagcagatcg 8376 Query: 352 acatgttctgtgacaattgattcgatggcagattcaataaaaaagaaaactgaatctaat 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8375 acatgttctgtgacaattgattcgatggcagattcaataaaaaagaaaactgaatctaat 8316 Query: 412 tttgcaattgtctttttgaagaatttggcagagtctagctgttcaaggttatgcaactta 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8315 tttgcaattgtctttttgaagaatttggcagagtctagctgttcaaggttatgcaactta 8256 Query: 472 ttgaatgcttggtcaatggactctttttgtagaaccttctcgaatgacccaaaaattgcc 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8255 ttgaatgcttggtcaatggactctttttgtagaaccttctcgaatgacccaaaaattgcc 8196 Query: 532 cttaaatggtccaagagtttagattttataattgttaactgttgtgatcctttatccgca 591 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8195 cttaaatggtccaagagtttagattttataattgttaactgttgtgatcctttatccgca 8136 Query: 592 tctgaaaatttattaacgtgctcccgcagttttataatttcatcttgtaaaatatgatgg 651 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8135 tctgaaaatttattaacgtgctcccgcagttttataatttcatcttgtaaaatatgatgg 8076 Query: 652 tcgttccccaattcttccagttgttcttggagaagctggttatcatccatgtagtatgtc 711 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8075 tcgttccccaattcttccagttgttcttggagaagctggttatcatccatgtagtatgtc 8016 Query: 712 gattttcgcaaagcagttttcaatttcttacggagttccatgacatcttcttctgttcta 771 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8015 gattttcgcaaagcagttttcaatttcttacggagttccatgacatcttcttctgttcta 7956 Query: 772 gcctccaacatttgcatttgagcttgagcatcaatcagcttttgggaaaggtcttttttt 831 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7955 gcctccaacatttgcatttgagcttgagcatcaatcagcttttgggaaaggtcttttttt 7896 Query: 832 tcattttgtaaaacttctatttcgaga-tcatattcaattcgttgtgtatgccatcttgc 890 |||| |||||||||||||| | ||||| ||||||||||| |||||||||||||||||||| Sbjct: 7895 tcatcttgtaaaacttcta-tccgagattcatattcaatccgttgtgtatgccatcttgc 7837 Query: 891 tgaaatttcctctaaa 906 |||| ||||||||||| Sbjct: 7836 tgaattttcctctaaa 7821 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,211 Number of Sequences: 1807 Number of extensions: 14211 Number of successful extensions: 1715 Number of sequences better than 1.0e-20: 1 length of query: 909 length of database: 10,358,551 effective HSP length: 16 effective length of query: 893 effective length of database: 10,329,639 effective search space: 9224367627 effective search space used: 9224367627 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)