BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZA02RM1.SCF screened BAC_end (922 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1114 1459 0.0 >3x_Contig1114 Length = 6488 Score = 1459 bits (736), Expect = 0.0 Identities = 834/861 (96%), Gaps = 5/861 (0%) Strand = Plus / Plus Query: 49 attctccttcataacttgttctgatttggctt-ataatctctcgactttttctgttcgta 107 ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 4592 attctccttcataacctgttctgatttggcttcataatctctcgactttttctgttcgta 4651 Query: 108 tacagataattctcttctaaattgagcaaactgctgtgctacctcattcttgatcacttt 167 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 4652 tacagataattctcttctaaattgagcaaactgctgtgctacctcattcttgatcacctt 4711 Query: 168 atcagtttgtttagacgttatggatcttatgacgnnattttttaactgacaggtganaga 227 |||||||||||||||||||||||||||||||||| ||||| ||||| || ||||| ||| Sbjct: 4712 atcagtttgtttagacgttatggatcttatgacgttattttctaacttactggtgataga 4771 Query: 228 cgatattatagggtcagttagaaacagactattgccattgtgataaaaacttccatccat 287 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4772 cgataatagagggtcagttagaaacagactattgccattgtgataaaaacttccatccat 4831 Query: 288 cataaaacgacttaaactggaattgctaccgatctcagaactttcagaagtagattgagc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4832 cataaaacgacttaaactggaattgctaccgatctcagaactttcagaagtagattgagc 4891 Query: 348 ttcttgcaacattcctagttcttttactcttgcatcgatgtcttcccgcagtaaaactat 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4892 ttcttgcaacattcctagttcttttactcttgcatcgatgtcttcccgcagtaaaactat 4951 Query: 408 ggcattatgtatgttttcaggtaaactctccatggaatttatagcatcaagttgtttaga 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4952 ggcattatgtatgttttcaggtaaactctccatggaatttatagcatcaagttgtttaga 5011 Query: 468 tgcattttcgaaaagctcaatggctctactaagtttattcctcttgatataggattctgc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5012 tgcattttcgaaaagctcaatggctctactaagtttattcctcttgatataggattctgc 5071 Query: 528 atcatctatcgtctcgtaaacctataatattaagaagtaacgtcataaatatcagttagt 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5072 atcatctatcgtctcgtaaacctataatattaagaagtaacgtcataaatatcagttagt 5131 Query: 588 catttgattaattcgagggttttgagtgcaaaagagaatcatacgttattaagctcggtg 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5132 catttgattaattcgagggttttgagtgcaaaagagaatcatacgttattaagctcggtg 5191 Query: 648 gtcatctttatagtcccatttcttaagaataattatcngttggaaagaagtgattttaaa 707 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 5192 gtcatctttatagtcccatttcttaagaataattatc-gttggaaagaagtgattttaaa 5250 Query: 708 ataatcttcaaaggtttggctgtacatgaagcgtgcctt-acgtagggcattcctccaaa 766 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 5251 ataatcttcaaaggtttggctgtacatgaagcgtgccttaacgtagggcattcctccaaa 5310 Query: 767 atactgtctgtcacatttgctctcttgaaaacaagtcaagaagatccttaattgcgttag 826 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 5311 atactgtctgtcacatttgctctcttgaaaacatgtcaagaagatccttaattgcgttag 5370 Query: 827 -accaaaaacagattaaaaaggtgcgaactggaattagaccctggtctttgaagaaattt 885 || |||||||||||| |||| ||||||||| ||||||||||| || ||||| || ||| Sbjct: 5371 aacaaaaaacagattataaagttgcgaactgaaattagaccct-gtttttgagaaatttt 5429 Query: 886 aaaaaaaacacgttaccaaac 906 || ||||||| |||| ||||| Sbjct: 5430 aataaaaacaggttaacaaac 5450 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6704 Number of Sequences: 1807 Number of extensions: 6704 Number of successful extensions: 58 Number of sequences better than 1.0e-20: 1 length of query: 922 length of database: 10,358,551 effective HSP length: 16 effective length of query: 906 effective length of database: 10,329,639 effective search space: 9358652934 effective search space used: 9358652934 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)