BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC14ZA03FM1.SCF screened BAC_end
         (933 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1467                                                        1574   0.0  

>3x_Contig1467 
          Length = 7717

 Score = 1574 bits (794), Expect = 0.0
 Identities = 816/824 (99%)
 Strand = Plus / Plus

                                                                        
Query: 90   tcaagaggggaaattaaatcaaagcagcaatatattgatcaatggtgcctctacaatgac 149
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5754 tcaagaggggaaattaaatcaaagcagcaatatattgatcaatggtgcctctacaatgac 5813

                                                                        
Query: 150  cggaatatttgcactacaactcttaaagtttcattacaggatattgaacagaatcgtgtt 209
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5814 cggaatatttgcactacaactcttaaagtttcattacaggatattgaacagaatcgtgtt 5873

                                                                        
Query: 210  aatctcatttattttcggtatgaacttcattaagtcaaatttgcctgaactagtcgatga 269
            |||||||| ||  | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5874 aatctcatctacctccggtatgaacttcattaagtcaaatttgcctgaactagtcgatga 5933

                                                                        
Query: 270  attgctcttcatcgactatgcagcaacgaacggtaaaatctacaaaccattaagcgatct 329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5934 attgctcttcatcgactatgcagcaacgaacggtaaaatctacaaaccattaagcgatct 5993

                                                                        
Query: 330  agtggcaagcaatgaattggttgaatataacaatgaaactggaaattttataactcaacc 389
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5994 agtggcaagcaatgaattggttgaatataacaatgaaactggaaattttataactcaacc 6053

                                                                        
Query: 390  atttggccagggtagcttcaatttagttcttgactttattggagggtatgacattatcgg 449
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6054 atttggccagggtagcttcaatttagttcttgactttattggagggtatgacattatcgg 6113

                                                                        
Query: 450  tcactcttcttccattttgtccaaagatgctacttacatcacaaccgttggcgataataa 509
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6114 tcactcttcttccattttgtccaaagatgctacttacatcacaaccgttggcgataataa 6173

                                                                        
Query: 510  atcgaattacaagaaagatacttttaattcatggggtactgcaagttctaatattagaaa 569
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6174 atcgaattacaagaaagatacttttaattcatggggtactgcaagttctaatattagaaa 6233

                                                                        
Query: 570  gctgttcggacaggtgctatggtctttcgattatcaaatgttntattttgatccaaatgc 629
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 6234 gctgttcggacaggtgctatggtctttcgattatcaaatgttttattttgatccaaatgc 6293

                                                                        
Query: 630  caaattagcgacaaatgaatggccaaaaaaatgtcatgagctaatagaaagtgaagttgt 689
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6294 caaattagcgacaaatgaatggccaaaaaaatgtcatgagctaatagaaagtgaagttgt 6353

                                                                        
Query: 690  caagtttattcctgtagatagggtatatgattggaaagaacatcaaaaggcattttccta 749
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6354 caagtttattcctgtagatagggtatatgattggaaagaacatcaaaaggcattttccta 6413

                                                                        
Query: 750  tctgcagacaggccgtgcacatggtaaagttgttttaaaggtagagaagttttgaacttt 809
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6414 tctgcagacaggccgtgcacatggtaaagttgttttaaaggtagagaagttttgaacttt 6473

                                                                        
Query: 810  aagctgcacttatgaatatgtgctaatatcttgcgaaatgaatttatgaaaagatgttgn 869
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 6474 aagctgcacttatgaatatgtgctaatatcttgcgaaatgaatttatgaaaagatgttga 6533

                                                        
Query: 870  acgaccaaaatgaccattgatatggctacggcttataatcattg 913
            ||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 6534 acgacaaaaatgaccaatgatatggctacggcttataatcattg 6577


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7002
Number of Sequences: 1807
Number of extensions: 7002
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 933
length of database: 10,358,551
effective HSP length: 16
effective length of query: 917
effective length of database: 10,329,639
effective search space: 9472278963
effective search space used: 9472278963
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)