BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC14ZA07FM1.SCF screened BAC_end
         (913 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1774                                                        1453   0.0  

>3x_Contig1774 
          Length = 27771

 Score = 1453 bits (733), Expect = 0.0
 Identities = 773/781 (98%), Gaps = 4/781 (0%)
 Strand = Plus / Minus

                                                                         
Query: 86    atcaaatgatttttaagataaaaaggtagaccaaaataataataccaaacaaacccaatc 145
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16951 atcaaatgatttttaagataaaaaggtagaccaaaataataataccaaacaaacccaatc 16892

                                                                         
Query: 146   gggactaaataagatcccagtaagactcaccgaaccaacatgtcctcacttgacatcaat 205
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16891 gggactaaataagatcccagtaagactcaccgaaccaacatgtcctcacttgacatcaat 16832

                                                                         
Query: 206   gagcaacgtgctcttataaagtctgctcacagatacatctcagagaaactcgaggatcac 265
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16831 gagcaacgtgctcttataaagtctgctcacagatacatctcagagaaactcgaggatcac 16772

                                                                         
Query: 266   ttctcatccgagtttttaccaaaggctcttgtgatttgtggatctggtttaagtggaatc 325
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16771 ttctcatccgagtttttaccaaaggctcttgtgatttgtggatctggtttaagtggaatc 16712

                                                                         
Query: 326   tcaaccaagatcgctgatgaaccaaagccattgattctgtcttattcgaccattcctggc 385
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16711 tcaaccaagatcgctgatgaaccaaagccattgattctgtcttattcgaccattcctggc 16652

                                                                         
Query: 386   ttcaaagtcagcaccgtacctggacatagtggtgagttgatctttggctacatgaacggt 445
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16651 ttcaaagtcagcaccgtacctggacatagtggtgagttgatctttggctacatgaacggt 16592

                                                                         
Query: 446   gcgcctgtcgtcttaatgaatggccgtttgcattcttatgagggccattccttagcagaa 505
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16591 gcgcctgtcgtcttaatgaatggccgtttgcattcttatgagggccattccttagcagaa 16532

                                                                         
Query: 506   acagtgcatcctatccgtgcattgcacttgttggggtcaatcaatgtcttgatcgtaaca 565
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16531 acagtgcatcctatccgtgcattgcacttgttggggtcaatcaatgtcttgatcgtaaca 16472

                                                                         
Query: 566   aatgcagccggtggtatcaatgcctcctttaaggctggggatttaatgtgtgtctacgac 625
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16471 aatgcagccggtggtatcaatgcctcctttaaggctggggatttaatgtgtgtctacgac 16412

                                                                         
Query: 626   catatcaatttcccaggattatgcgggttccatcctct-aggggagctaattttgacgaa 684
             |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 16411 catatcaatttcccaggattatgcgggttccatcctctaaggggagctaattttgacgaa 16352

                                                                         
Query: 685   tttgggccaagattcttggctaccagtgatgcttatgacttggaactacgtaagcttatt 744
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 16351 tttgggccaagattcttggctaccagtgatgcttatgacttggaactacgtaagc-tatt 16293

                                                                         
Query: 745   gttttcaaag-aaaaagagctcaatatcgaaagaaagatccatgagggtacctactcata 803
             |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16292 gttttcaaagaaaaaagagctcaatatcgaaagaaagatccatgagggtacctactcata 16233

                                                                         
Query: 804   cgttcatggtcctacctttgaaagc-gaggtgaaacacgtttcttgagattgcctggtac 862
             |||||||||||||||||| |||||| ||| |||| ||||||||||||||||| |||||||
Sbjct: 16232 cgttcatggtcctaccttcgaaagcagagctgaatcacgtttcttgagattggctggtac 16173

              
Query: 863   a 863
             |
Sbjct: 16172 a 16172


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5213
Number of Sequences: 1807
Number of extensions: 5213
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 913
length of database: 10,358,551
effective HSP length: 16
effective length of query: 897
effective length of database: 10,329,639
effective search space: 9265686183
effective search space used: 9265686183
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)