BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZA11FM1.SCF screened BAC_end (931 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1224 1596 0.0 >3x_Contig1224 Length = 5948 Score = 1596 bits (805), Expect = 0.0 Identities = 831/839 (99%), Gaps = 1/839 (0%) Strand = Plus / Plus Query: 88 tgaagtccaaatcacgaaccataagccgactgaacataaatttgcatctgaagagtcaaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3894 tgaagtccaaatcacgaaccataagccgactgaacataaatttgcatctgaagagtcaaa 3953 Query: 148 ttgactccagttttcagtgaaagggttgatactatcacaagaacctacattactgttcaa 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3954 ttgactccagttttcagtgaaagggttgatactatcacaagaacctacattactgttcaa 4013 Query: 208 attccagtcagtactgttgcatccgcctattcggctaccagtaccgaaatcaggactatt 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4014 attccagtcagtactgttgcatccgcctattcggctaccagtaccgaaatcaggactatt 4073 Query: 268 aatacctcttgttttaggtgaatatgctcgtgtaatgtaacagaatatggtgtcgatttt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4074 aatacctcttgttttaggtgaatatgctcgtgtaatgtaacagaatatggtgtcgatttt 4133 Query: 328 ggataatggtacaatagatagaaaaattgttgttacaatggacactgtcaatgaaataaa 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4134 ggataatggtacaatagatagaaaaattgttgttacaatggacactgtcaatgaaataaa 4193 Query: 388 tgaaattatagtcaaaatattctcattaataagtcttttcctcgatatatgaaaaagcga 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4194 tgaaattatagtcaaaatattctcattaataagtcttttcctcgatatatgaaaaagcga 4253 Query: 448 caaaatacctgatggcggtattatgtttaaaagaagcatgaaaattagtataaataatct 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4254 caaaatacctgatggcggtattatgtttaaaagaagcatgaaaattagtataaataatct 4313 Query: 508 tgattttgtgggttttcggagatttgaatcgcgtgggacaaaaaacatttcaccaataat 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4314 tgattttgtgggttttcggagatttgaatcgcgtgggacaaaaaacatttcaccaataat 4373 Query: 568 cgcagatatggtaatcaagcacgagaatgtacctgccaacgacataactgagaataaaac 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4374 cgcagatatggtaatcaagcacgagaatgtacctgccaacgacataactgagaataaaac 4433 Query: 628 gaataactcagggtcattgtccaaagtttgtatataatgttntgtgaacaacggttttag 687 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 4434 gaataactcagggtcattgtccaaagtttgtatataatgttttgtgaacaacggttttag 4493 Query: 688 gtttataacagaaaaataccaaaaagtggcaacgtgaatggtccaaattctatggaaatt 747 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4494 gtttatcacagaaaaataccaaaaagtggcaacgtgaatggtccaaattctatggaaatt 4553 Query: 748 cgtgatcaaatggtaccaagtacgtgattcaatataggttttccgtaaggattttgacca 807 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4554 cgtgatcaaatggtaccaagtacgtgattcaatataggttttccgtaaggattttgacca 4613 Query: 808 ttcaatctgtgtgaacttagaatatttcatatcccgcggtagatcgccatagttggtacc 867 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 4614 ttcaatctgtgtgaacttagaatatttcatatcccgcggtagatcggcatagttggtacc 4673 Query: 868 atctttccatttaaactgggttatggttttttaatgaccagnaacattgattaatatcg 926 ||||||| ||||||||||| | |||| |||||||||||||| ||||||||||||||||| Sbjct: 4674 atctttcaatttaaactggttaatgg-tttttaatgaccagaaacattgattaatatcg 4731 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6539 Number of Sequences: 1807 Number of extensions: 6539 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 931 length of database: 10,358,551 effective HSP length: 16 effective length of query: 915 effective length of database: 10,329,639 effective search space: 9451619685 effective search space used: 9451619685 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)