BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC14ZB07RM1.SCF screened BAC_end
         (909 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1463                                                        1645   0.0  

>3x_Contig1463 
          Length = 9363

 Score = 1645 bits (830), Expect = 0.0
 Identities = 854/864 (98%)
 Strand = Plus / Plus

                                                                        
Query: 45   gcttgtcaccaagtggaggtagtgctgttcccggtgcaggaaacatgaccggaggtgtta 104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1762 gcttgtcaccaagtggaggtagtgctgttcccggtgcaggaaacatgaccggaggtgtta 1821

                                                                        
Query: 105  atgattctgccatcccaggttctgacctgatgatgcattatccccaacagtatatgaacc 164
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1822 atgattctgccatcccaggttctgacctgatgatgcattatccccaacagtatatgaacc 1881

                                                                        
Query: 165  ataatgggcaaaggccaatgttctggatgaatccggatttgaattctagtgccatcgacg 224
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1882 ataatgggcaaaggccaatgttctggatgaatccggatttgaattctagtgccatcgacg 1941

                                                                        
Query: 225  acaccactgcaggcgaagatccgcagaatcaggattcctttgtgcgcggtgcatcattca 284
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1942 acaccactgcaggcgaagatccgcagaatcaggattcctttgtgcgcggtgcatcattca 2001

                                                                        
Query: 285  ctttagaatcttctgaacaggggaatgatgccaaggtgccaggtgctaacacttctagaa 344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2002 ctttagaatcttctgaacaggggaatgatgccaaggtgccaggtgctaacacttctagaa 2061

                                                                        
Query: 345  gacaaactttccatgcagtgtcagctactgacttgttgaacaattctacttccagtccca 404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2062 gacaaactttccatgcagtgtcagctactgacttgttgaacaattctacttccagtccca 2121

                                                                        
Query: 405  ctgaaacgacggatgccactggtaccaatgcatcagcaacatcacccgaagcttctgcct 464
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2122 ctgaaacgacggatgccactggtaccaatgcatcagcaacatcacccgaagcttctgcct 2181

                                                                        
Query: 465  cgaaaaaagagatgcaggatcgtgtttatcctcaagctgctgcttacccttacaccggtg 524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2182 cgaaaaaagagatgcaggatcgtgtttatcctcaagctgctgcttacccttacaccggtg 2241

                                                                        
Query: 525  cattgctgcaaccaaatcctgtactatctggccatccactgggtcatcatccccatccta 584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2242 cattgctgcaaccaaatcctgtactatctggccatccactgggtcatcatccccatccta 2301

                                                                        
Query: 585  tcggttccccattccctggttacggttttaatacagctttctctcctgtcccgggcccta 644
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2302 tcggttccccattccctggttacggttttaatacagctttctctcctgtcccgggcccta 2361

                                                                        
Query: 645  ctaacacgttgaatgcaggttctccagccatctccgcagatggcaaagaagcaaacagca 704
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2362 ctaacacgttgaatgcaggttctccagccatctccgcagatggcaaagaagcaaacagca 2421

                                                                        
Query: 705  gcggcgatccaagtggccaatctaaccgtcatgtacactctggaactaattccccaggat 764
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2422 gcggcgatccaagtggccaatctaaccgtcatgtacactctggaactaattccccaggat 2481

                                                                        
Query: 765  tgagtcaacctgntagtctgccaatgtcangacctaacccgtggatgtttgctgctcctc 824
            |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2482 tgagtcaacctggtagtctgccaatgtcaggacctaacccgtggatgtttgctgctcctc 2541

                                                                        
Query: 825  acggtagtcctaacttcctggttccacaccctcatcatncgggtcacngcagcccttcag 884
            |||||||||||||||||||||||||||||||||||||| ||||||||    ||||| |||
Sbjct: 2542 acggtagtcctaacttcctggttccacaccctcatcatccgggtcacgcaggccctccag 2601

                                    
Query: 885  ctggccatcanagaccacanagca 908
            |||||||||| |||||||| ||||
Sbjct: 2602 ctggccatcaaagaccacagagca 2625


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4065
Number of Sequences: 1807
Number of extensions: 4065
Number of successful extensions: 20
Number of sequences better than 1.0e-20: 1
length of query: 909
length of database: 10,358,551
effective HSP length: 16
effective length of query: 893
effective length of database: 10,329,639
effective search space: 9224367627
effective search space used: 9224367627
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)