BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZC02FM1.SCF screened BAC_end (907 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1708 963 0.0 3x_Contig1760 644 0.0 >3x_Contig1708 Length = 19451 Score = 963 bits (486), Expect = 0.0 Identities = 515/524 (98%), Gaps = 1/524 (0%) Strand = Plus / Plus Query: 384 atctcatcgataaagagattgcatgtcgacgcagcaactgataaagaaatttttaaagtc 443 |||||||||||||||||||||||| | | ||||||||||||||| |||||||||||||| Sbjct: 1 atctcatcgataaagagattgcatttgtaggcagcaactgataaataaatttttaaagtc 60 Query: 444 acgtgacaagtatcaacagtttctgaaaaaatctgaaaatctcaattacaaaaggtttct 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtgacaagtatcaacagtttctgaaaaaatctgaaaatctcaattacaaaaggtttct 120 Query: 504 aatcgcaagcaattctcttgttattcggttcaacctgcatttaaactcgaattataccgt 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aatcgcaagcaattctcttgttattcggttcaacctgcatttaaactcgaattataccgt 180 Query: 564 ctattgcctgattctctgactaagcgaagcagtttattatgtctaagttttatgacgatg 623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ctattgcctgattctctgactaagcgaagcagtttattatgtctaagttttatgacgatg 240 Query: 624 atgacgctgtggattatgacgacgatgtacctgatttccaggacgaggatgaatttgacg 683 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 atgacgctgtggattatgacgacgatgtacctgatttccaggacgaggatgaatttgacg 300 Query: 684 attatttaaacgatgaagaatttgaattgatgaaccagttgtttcccctggcgnaagagc 743 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 301 attatttaaacgatgaagaatttgaattgatgaaccagttgtttcccctggcgaaggagc 360 Query: 744 aattagctgattatcanggttgggataacttggccgtgaaagttgcgatttttgatcaca 803 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 aattagctgattatcagggttgggataacttggccgtgaaagttgcgatttttgatcaca 420 Query: 804 atttcgagttagaacctgcattggtcgatttaaagagaagattcaagaaaaagggtatgt 863 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 atttcgagttagaacctgcattggtcgatttaaagagaagattcaagaaaaagggtatgt 480 Query: 864 ataattggcattggacgtggcgggtgttttatatttttacgtgt 907 ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 481 ataattggcattggacgtggc-ggtgttttatatttttacgtgt 523 >3x_Contig1760 Length = 27266 Score = 644 bits (325), Expect = 0.0 Identities = 338/341 (99%), Gaps = 1/341 (0%) Strand = Plus / Plus Query: 83 ccccttccatagcaaatgctggggttcccacgctcttgcaatgctt-cgcggtacgatat 141 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 26926 ccccttccatagcaaatgctggggttcccacgctcttgcaatgctttcgcggtacgatat 26985 Query: 142 tatacaaaacacaactctgtatcactcgttgatgcgttgtcagcacattctccggaactg 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26986 tatacaaaacacaactctgtatcactcgttgatgcgttgtcagcacattctccggaactg 27045 Query: 202 tcatccgaaaacttattggctatatcacttctgttctcttcaaaatattacctaggaaat 261 |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27046 tcatccgaaaacgtatcggctatatcacttctgttctcttcaaaatattacctaggaaat 27105 Query: 262 tcaactcgttcacctgttaaatcacctaccgggaattaccttcttgaccaaaaaaagaat 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27106 tcaactcgttcacctgttaaatcacctaccgggaattaccttcttgaccaaaaaaagaat 27165 Query: 322 gtactaatggacaaactgcactgtttacaactcacttcatgctatcgataacaactcatc 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27166 gtactaatggacaaactgcactgtttacaactcacttcatgctatcgataacaactcatc 27225 Query: 382 tcatctcatcgataaagagattgcatgtcgacgcagcaact 422 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 27226 tcatctcatcgataaagagattgcatgtcgacgcagcaact 27266 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7614 Number of Sequences: 1807 Number of extensions: 7614 Number of successful extensions: 309 Number of sequences better than 1.0e-20: 2 length of query: 907 length of database: 10,358,551 effective HSP length: 16 effective length of query: 891 effective length of database: 10,329,639 effective search space: 9203708349 effective search space used: 9203708349 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)