BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZC08RM1.SCF screened BAC_end (907 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1744 1669 0.0 >3x_Contig1744 Length = 24119 Score = 1669 bits (842), Expect = 0.0 Identities = 855/860 (99%) Strand = Plus / Minus Query: 48 taagtgctcatttacacaaaccttccatcgccaacgtcagacagccatcaatgggtccta 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15913 taagtgctcatttacacaaaccttccatcgccaacgtcagacagccatcaatgggtccta 15854 Query: 108 ctttcggtgtgaaaggtggtgctgcaggtggtgggtatgctcaggttatcccaatggatg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15853 ctttcggtgtgaaaggtggtgctgcaggtggtgggtatgctcaggttatcccaatggatg 15794 Query: 168 agttcaacatgcatttaactggtgatattcatgcaatcggtgctgctattattttactag 227 |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 15793 agttcaacatgcatttaactggtgatattcatgcaatcggtgctgctaataacttactag 15734 Query: 228 cagcagccatagatacaaggatgttccatgaggctactcaaaagaagcacgaaacgtttt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15733 cagcagccatagatacaaggatgttccatgaggctactcaaaagaagcacgaaacgtttt 15674 Query: 288 acaagagattggtccctgttaagaagggtgtcagatcatttacaccatctatgttgacaa 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15673 acaagagattggtccctgttaagaagggtgtcagatcatttacaccatctatgttgacaa 15614 Query: 348 ggttgaacaaattaggaattaacaaaactaatcctgatgatttaaataccgaggaaatta 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15613 ggttgaacaaattaggaattaacaaaactaatcctgatgatttaaataccgaggaaatta 15554 Query: 408 tcaaattcgcacgtctaaacattgacccagacactattactatcaagagggtggttgacg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15553 tcaaattcgcacgtctaaacattgacccagacactattactatcaagagggtggttgacg 15494 Query: 468 tcaacgatagaatgttacgtcaaatcacaattggtcaagcgccaactgaaaagggtttca 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15493 tcaacgatagaatgttacgtcaaatcacaattggtcaagcgccaactgaaaagggtttca 15434 Query: 528 caaggcaaacaggatttgacatcactgtcgcatcagagttgatggcaattttagcgttgt 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15433 caaggcaaacaggatttgacatcactgtcgcatcagagttgatggcaattttagcgttgt 15374 Query: 588 ctaaggacttgaaagatttgagagagcgtgtcggacgtatcgtaattggctctaactacg 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15373 ctaaggacttgaaagatttgagagagcgtgtcggacgtatcgtaattggctctaactacg 15314 Query: 648 aaaaagaacctataactgttaacgacattggatgtgcaggtgccattgctgcacttctaa 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15313 aaaaagaacctataactgttaacgacattggatgtgcaggtgccattgctgcacttctaa 15254 Query: 708 aggatgccgtaaagcctaacctgatgcaaacgcttgaagggacaccagttntggttcatg 767 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 15253 aggatgccgtaaagcctaacctgatgcaaacgcttgaagggacaccagttttggttcatg 15194 Query: 768 ctggtccatttgcaaacatctctattggcgcttcatcagttattgctgacagagttgctt 827 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15193 ctggtccatttgcaaacatctctattggcgcttcatcagttattgctgacagagttgctt 15134 Query: 828 tgaaacttgtangtaagccaaaagaagctgacgagagtgcagaatctggatatgttgtca 887 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15133 tgaaacttgtaggtaagccaaaagaagctgacgagagtgcagaatctggatatgttgtca 15074 Query: 888 ctgaagctggtttcgacttc 907 |||||||||||||||||||| Sbjct: 15073 ctgaagctggtttcgacttc 15054 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5299 Number of Sequences: 1807 Number of extensions: 5299 Number of successful extensions: 34 Number of sequences better than 1.0e-20: 1 length of query: 907 length of database: 10,358,551 effective HSP length: 16 effective length of query: 891 effective length of database: 10,329,639 effective search space: 9203708349 effective search space used: 9203708349 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)