BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZC12RM1.SCF screened BAC_end (933 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1708 1629 0.0 >3x_Contig1708 Length = 19451 Score = 1629 bits (822), Expect = 0.0 Identities = 879/891 (98%), Gaps = 6/891 (0%) Strand = Plus / Minus Query: 43 cttgtgctagtttgttcaagttttttaaagatacaccacctaaagtatctctaatatgtt 102 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 17815 cttgtgctagtttgttcaagttttctaaagatacaccacctaaagtatctctaatatgtt 17756 Query: 103 ccaccatcgattgtgcattatattccacaatagatttaccgataactttaatacatatat 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17755 ccaccatcgattgtgcattatattccacaatagatttaccgataactttaatacatatat 17696 Query: 163 cctgcaatgatgaaatgagtgagtccttcttgtctaaaagattggcagcctttnttcntc 222 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 17695 cctgcaatgatgaaatgagtgagtccttcttgtctaaaagattggcagccttctttcttc 17636 Query: 223 tagttttcttctgttgatggcgagccttagctagttgcggagaagttttcttaccattag 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17635 tagttttcttctgttgatggcgagccttagctagttgcggagaagttttcttaccattag 17576 Query: 283 tcaaggtcaacatccttttctttcgatcagaaaccggcaatacttcttcttcctcatcag 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17575 tcaaggtcaacatccttttctttcgatcagaaaccggcaatacttcttcttcctcatcag 17516 Query: 343 aatcttctaggtcagcaccacgtaaccggcgaagcctcgcctctgctttgtagtcatcgt 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17515 aatcttctaggtcagcaccacgtaaccggcgaagcctcgcctctgctttgtagtcatcgt 17456 Query: 403 catcttcgtcgtcgtcgtcctcatcatcatcactttctccggaagaagacgactcctgct 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17455 catcttcgtcgtcgtcgtcctcatcatcatcactttctccggaagaagacgactcctgct 17396 Query: 463 tcttaacagctctgggctttcttgaccgtttttttgcagctacccctgctttaagatctt 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17395 tcttaacagctctgggctttcttgaccgtttttttgcagctacccctgctttaagatctt 17336 Query: 523 catcagattctgtttcagaatcatccttctgagtttcttgtggatgttcggcttccttct 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17335 catcagattctgtttcagaatcatccttctgagtttcttgtggatgttcggcttccttct 17276 Query: 583 tttgagcttctaaccatctatctctaatattctcagcactaataccttgttcctttaaaa 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17275 tttgagcttctaaccatctatctctaatattctcagcactaataccttgttcctttaaaa 17216 Query: 643 actgggtcaaagcactgtttggtcctcttacgccactaccatcgttgttccgacgactcc 702 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17215 actgggtcaaagcactgtttggtcctcttacgccactaccatcgttgttccgacgactcc 17156 Query: 703 ttgctctatacatgtcgatatctcgtggaatagccccttaaccgccagtcgagactacct 762 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17155 ttgctctatacatgtcgatatctcgtggaatagccccttaaccgccagtcgagactacct 17096 Query: 763 tatctaccagcaacttcattgagatgagatgagattaagttntgattaattatttgctaa 822 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 17095 tatctaccagcaacttcattgagatgagatgagattaagttttgattaattatttgctaa 17036 Query: 823 c-ataatttcagacactgcaaacaataatgatgctactgatgagaaaaaaagc-aga-tt 879 | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 17035 caataatttcagacactgcaaacaataatgatgctactgatgagaaaaaaagcaagagat 16976 Query: 880 atgcgaggagaa-tatgctagaaga-tcacggaacctgca-gtgggctgtt 927 |||||||||||| |||||||||||| |||||||||||||| |||||||||| Sbjct: 16975 atgcgaggagaagtatgctagaagattcacggaacctgcaggtgggctgtt 16925 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8337 Number of Sequences: 1807 Number of extensions: 8337 Number of successful extensions: 313 Number of sequences better than 1.0e-20: 1 length of query: 933 length of database: 10,358,551 effective HSP length: 16 effective length of query: 917 effective length of database: 10,329,639 effective search space: 9472278963 effective search space used: 9472278963 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)