BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZD02FM1.SCF screened BAC_end (927 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1571 1558 0.0 >3x_Contig1571 Length = 13536 Score = 1558 bits (786), Expect = 0.0 Identities = 829/840 (98%), Gaps = 3/840 (0%) Strand = Plus / Minus Query: 88 gatccatactctttctctaacctctccgtgaaaacagatgcgtgaagagatcctaaaaat 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1597 gatccatactctttctctaacctctccgtgaaaacagatgcgtgaagagatcctaaaaat 1538 Query: 148 cctaatctccaaccttggcctagtgcatttgacgtttctctttggagggacactgatcta 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1537 cctaatctccaaccttggcctagtgcatttgacgtttctctttggagggacactgatcta 1478 Query: 208 tcatttaagacgagtctactaatatcatcgtctaacgctttgaattcggccccatcagca 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1477 tcatttaagacgagtctactaatatcatcgtctaacgctttgaattcggccccatcagca 1418 Query: 268 gggaaagctcctacgaagaccatgggttttggttcttcaaatcctggtaacacttcagta 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1417 gggaaagctcctacgaagaccatgggttttggttcttcaaatcctggtaacacttcagta 1358 Query: 328 atcgattctttaccgagatgcatcaaagtatcaccaatcttggcatccttagattctttc 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1357 atcgattctttaccgagatgcatcaaagtatcaccaatcttggcatccttagattctttc 1298 Query: 388 atgccaggtaccaaatacccgacttgacctgatttcagtgtgttagtagcgacacgatct 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1297 atgccaggtaccaaatacccgacttgacctgatttcagtgtgttagtagcgacacgatct 1238 Query: 448 gggtacattataccgcattccctcacttcatacttcaatccatttgcggcagtgatgatt 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1237 gggtacattataccgcattccctcacttcatacttcaatccatttgcggcagtgatgatt 1178 Query: 508 ttatctcctcttttcacttgaccatcaactatatgtacaagaagcaccactcctaaataa 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1177 ttatctcctcttttcacttgaccatcaactatatgtacaagaagcaccactcctaaataa 1118 Query: 568 gagtcataccacgaatccaccaataatgcacgtaatggtttctcaactttaccggtcgga 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1117 gagtcataccacgaatccaccaataatgcacgtaatggtttctcaactttaccggtcgga 1058 Query: 628 ggaggtattctatcaacaatagcgggtaacaattgctcgacgtgcaatccagttttagca 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1057 ggaggtattctatcaacaatagcgggtaacaattgctcgacgtgcaatccagttttagca 998 Query: 688 ctaactttgatacaatctgacttaggtagctcgaacatattttcaacctgttcttctgct 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 997 ctaactttgatacaatctgacttaggtagctcgaacatattttcaacctgttcttctgct 938 Query: 748 tggtcaatgtcagcaatgtccaagtcaatcttgtttatgacaggaataagtttcaaatcc 807 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 937 tggtcaatgtcagcaatgtccaagtcaatcttgtttatgacaggaataagtttcaaatcc 878 Query: 808 atactataangcgagtaanaagtttgcgactgtctgtgcttgtacacctttggnaagcgt 867 ||||||||| ||||| | ||||||||||||||||||||||| ||||| |||| |||||| Sbjct: 877 atactataa-gcgaggtaaaagtttgcgactgtctgtgcttgaacacc-ttgggaagcgt 820 Query: 868 caacgagttacaaagcg-caccacacgatgcatacgatcttgaaactttagcacggaaat 926 |||||||| |||||||| |||||||||||||||||||||||||||||| |||||| |||| Sbjct: 819 caacgagtaacaaagcgccaccacacgatgcatacgatcttgaaacttcagcacgaaaat 760 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5057 Number of Sequences: 1807 Number of extensions: 5057 Number of successful extensions: 34 Number of sequences better than 1.0e-20: 1 length of query: 927 length of database: 10,358,551 effective HSP length: 16 effective length of query: 911 effective length of database: 10,329,639 effective search space: 9410301129 effective search space used: 9410301129 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)