BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZD02RM1.SCF screened BAC_end (920 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig680 1681 0.0 >3x_Contig680 Length = 2471 Score = 1681 bits (848), Expect = 0.0 Identities = 864/868 (99%), Gaps = 1/868 (0%) Strand = Plus / Plus Query: 53 ttttcgttatttctgacgctggaaacaaaagagtacgagtttgttactaactccatgtgt 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 ttttcgttatttctgacgctggaaacaaaagagtacgagtttgttactaactccatgtgt 680 Query: 113 cctggaacataagctgtatcacttcctaaaactatggatttgatgttgtgttcgttttta 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 cctggaacataagctgtatcacttcctaaaactatggatttgatgttgtgttcgttttta 740 Query: 173 tagaaactctcatctaatctcgatttcacaaaggaaagaaatctgtttgcgttgggaaat 232 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 741 tagaaactctcatctaatctcgatttcacaaaggaaagaaatctgtctgcgttgggaaat 800 Query: 233 tctcccgattgaaacttatctgtaaatgcttgagagagcttgaaggggaatccgctgaag 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 801 tctcccgattgaaacttatctgtaaatgcttgagagagcttgaaggggaatccgctgaag 860 Query: 293 tcctttagctgggtaaatgacttgaattttgggaccatttgcttcattatcaattctctc 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 861 tcctttagctgggtaaatgacttgaattttgggaccatttgcttcattatcaattctctc 920 Query: 353 cttgtggtggatgaaagcttcatcttagtttgattgaaagcatgatccaaaagctgcata 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 921 cttgtggtggatgaaagcttcatcttagtttgattgaaagcatgatccaaaagctgcata 980 Query: 413 agtttcctggttctaaaagctttgaattgataccaccctattccaaatatcaccatcggg 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 981 agtttcctggttctaaaagctttgaattgataccaccctattccaaatatcaccatcggg 1040 Query: 473 aaaagcaaagcaagtaagaaaggcaaaacaaatactatcattgttatgaatccagcgaac 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1041 aaaagcaaagcaagtaagaaaggcaaaacaaatactatcattgttatgaatccagcgaac 1100 Query: 533 agtaacgtggaaagaataaaggaaaaagggctgattgaaaagataaatctgggattgtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1101 agtaacgtggaaagaataaaggaaaaagggctgattgaaaagataaatctgggattgtta 1160 Query: 593 aagggactttttctgaaaggatcccgtccaccaagtaccatgtttctcggcgtagaatgg 652 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1161 aagggactttttctgaaaggatcccgtccaccaagtaccatgtttctcggcgtagaatgg 1220 Query: 653 aaatttcgaagcgccatcttcacaggagagaccaaaatattctggttataatgtaaaaga 712 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1221 aaatttcgaagcgccatcttcacaggagagaccaaaatattctggttataatgtaaaaga 1280 Query: 713 ttcatccggggattcaaagctgccaggagtgggaaccgtggcaccaaattcacaaactga 772 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1281 ttcatccggggattcaaagctgccaggagtgggaaccgtggcaccaaattcacaaactga 1340 Query: 773 cccgtcttgacacatccatgactagcaggactgtatgcttttaactttgtcaaggattga 832 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1341 cccgtcttgacacatccatgactagcaggactgtatgcttttaactttgtcaaggattga 1400 Query: 833 aatggtcgcagcccaatctgtgatttaacgcacaattgaaatcgatttagggggaagcat 892 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1401 aatggtcgcagcccaatctgtgatttaacgcacaattgaaatcgattta-ggggaagcat 1459 Query: 893 ctcacaggaggatatcacaatgtctgat 920 ||||||| || ||||||||||||||||| Sbjct: 1460 ctcacagaagaatatcacaatgtctgat 1487 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6585 Number of Sequences: 1807 Number of extensions: 6585 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 920 length of database: 10,358,551 effective HSP length: 16 effective length of query: 904 effective length of database: 10,329,639 effective search space: 9337993656 effective search space used: 9337993656 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)