BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC14ZD03RM1.SCF screened BAC_end
         (949 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1519                                                        1624   0.0  

>3x_Contig1519 
          Length = 9351

 Score = 1624 bits (819), Expect = 0.0
 Identities = 892/908 (98%), Gaps = 7/908 (0%)
 Strand = Plus / Minus

                                                                        
Query: 46   gcttgctgcctgatat-atattgggcttttttacttgcgtcattttcagtcttcattaga 104
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2832 gcttgctgcctgatatcatattgggcttttttacttgcgtcattttcagtcttcattaga 2773

                                                                        
Query: 105  tttttcacttctctacgtctttggaccaggttggccaataatcttggcagtacacctcgt 164
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2772 tttttcacttctctacgtctttggaccaggttggccaataatcttggcagtacacctcgt 2713

                                                                        
Query: 165  gatttttctcttgaaggcacatctggaagttcttcattatcctgtggattcctgttt-ca 223
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||
Sbjct: 2712 gatttttctcttgaaggcacatctggaagttcttcattatcctgtggattcctgtcaaca 2653

                                                                        
Query: 224  gtagtgaagcaaatattaaactcttgaatgatagatgggtacaacgaattgaaatccatg 283
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2652 gtagtgaagcaaatattaaactcttgaatgatagatgggtacaacgaattgaaatccatg 2593

                                                                        
Query: 284  accaagatatagtttttatgcaaacctttttctggttcaaagaccaacccaccctgatat 343
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2592 accaagatatagtttttatgcaaacctttttctggttcaaagaccaacccaccctgatat 2533

                                                                        
Query: 344  tttgattttttactggacacttgtggctccataggatcttcattcttttgttgtctgtct 403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2532 tttgattttttactggacacttgtggctccataggatcttcattcttttgttgtctgtct 2473

                                                                        
Query: 404  tgcttcatttgccttgtttctttatcaggaacaatgtaatcatttctgttaaattcatga 463
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2472 tgcttcatttgccttgtttctttatcaggaacaatgtaatcatttctgttaaattcatga 2413

                                                                        
Query: 464  agcaaaatatattcatttctaccagctcttgtaccacccaaagtctgtctccatccattg 523
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2412 agcaaaatatattcatttctaccagctcttgtaccacccaaagtctgtctccatccattg 2353

                                                                        
Query: 524  cctgctaaattagtcagttgtttggttaaagagagaatttgaatgcggaatgcaacttct 583
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2352 cctgctaaattagtcagttgtttggttaaagagagaatttgaatgcggaatgcaacttct 2293

                                                                        
Query: 584  gctgttataatggagttttcgatgttttcgcctagcgctagaagcatctgggattcatct 643
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2292 gctgttataatggagttttcgatgttttcgcctagcgctagaagcatctgggattcatct 2233

                                                                        
Query: 644  tcctgatatattgggtttaggtaattaatttcgagagattttctttcaataccgcaggaa 703
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2232 tcctgatatattgggtttaggtaattaatttcgagagattgtctttcaataccgcaggaa 2173

                                                                        
Query: 704  acttgatacatttcgtttagttcc-caattttgacattttggagttagtgactgacccat 762
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2172 acttgatacatttcgtttagttccgcaattttgacattttggagttagtgactgacccat 2113

                                                                        
Query: 763  ttcattggaaatgtcacataacaacctacctgcanataaatccctaactatgaactgtgt 822
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2112 ttcattggaaatgtcacataacaacctacctgcaaataaatccctaactatgaactgtgt 2053

                                                                        
Query: 823  catactattattatgttnttccaaacttgtctggccatgctttccgcagtcttcttcc-a 881
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |
Sbjct: 2052 catactattattatgtt-ttccaaacttgtctggccatgctttccgcagtcttctcccaa 1994

                                                                        
Query: 882  agacactaaattgaggaatatttaactcattagctctgtgtngccag-acatnccanatg 940
            |||||||||||||||||||||||||||||| |||||||||| ||||| |||| | | |||
Sbjct: 1993 agacactaaattgaggaatatttaactcataagctctgtgt-gccagaacatccaagatg 1935

                    
Query: 941  acaccttc 948
            ||||||||
Sbjct: 1934 acaccttc 1927


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7711
Number of Sequences: 1807
Number of extensions: 7711
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 949
length of database: 10,358,551
effective HSP length: 16
effective length of query: 933
effective length of database: 10,329,639
effective search space: 9637553187
effective search space used: 9637553187
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)