BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZD03RM1.SCF screened BAC_end (949 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1519 1624 0.0 >3x_Contig1519 Length = 9351 Score = 1624 bits (819), Expect = 0.0 Identities = 892/908 (98%), Gaps = 7/908 (0%) Strand = Plus / Minus Query: 46 gcttgctgcctgatat-atattgggcttttttacttgcgtcattttcagtcttcattaga 104 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2832 gcttgctgcctgatatcatattgggcttttttacttgcgtcattttcagtcttcattaga 2773 Query: 105 tttttcacttctctacgtctttggaccaggttggccaataatcttggcagtacacctcgt 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2772 tttttcacttctctacgtctttggaccaggttggccaataatcttggcagtacacctcgt 2713 Query: 165 gatttttctcttgaaggcacatctggaagttcttcattatcctgtggattcctgttt-ca 223 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2712 gatttttctcttgaaggcacatctggaagttcttcattatcctgtggattcctgtcaaca 2653 Query: 224 gtagtgaagcaaatattaaactcttgaatgatagatgggtacaacgaattgaaatccatg 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2652 gtagtgaagcaaatattaaactcttgaatgatagatgggtacaacgaattgaaatccatg 2593 Query: 284 accaagatatagtttttatgcaaacctttttctggttcaaagaccaacccaccctgatat 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2592 accaagatatagtttttatgcaaacctttttctggttcaaagaccaacccaccctgatat 2533 Query: 344 tttgattttttactggacacttgtggctccataggatcttcattcttttgttgtctgtct 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2532 tttgattttttactggacacttgtggctccataggatcttcattcttttgttgtctgtct 2473 Query: 404 tgcttcatttgccttgtttctttatcaggaacaatgtaatcatttctgttaaattcatga 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2472 tgcttcatttgccttgtttctttatcaggaacaatgtaatcatttctgttaaattcatga 2413 Query: 464 agcaaaatatattcatttctaccagctcttgtaccacccaaagtctgtctccatccattg 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2412 agcaaaatatattcatttctaccagctcttgtaccacccaaagtctgtctccatccattg 2353 Query: 524 cctgctaaattagtcagttgtttggttaaagagagaatttgaatgcggaatgcaacttct 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2352 cctgctaaattagtcagttgtttggttaaagagagaatttgaatgcggaatgcaacttct 2293 Query: 584 gctgttataatggagttttcgatgttttcgcctagcgctagaagcatctgggattcatct 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2292 gctgttataatggagttttcgatgttttcgcctagcgctagaagcatctgggattcatct 2233 Query: 644 tcctgatatattgggtttaggtaattaatttcgagagattttctttcaataccgcaggaa 703 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2232 tcctgatatattgggtttaggtaattaatttcgagagattgtctttcaataccgcaggaa 2173 Query: 704 acttgatacatttcgtttagttcc-caattttgacattttggagttagtgactgacccat 762 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2172 acttgatacatttcgtttagttccgcaattttgacattttggagttagtgactgacccat 2113 Query: 763 ttcattggaaatgtcacataacaacctacctgcanataaatccctaactatgaactgtgt 822 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2112 ttcattggaaatgtcacataacaacctacctgcaaataaatccctaactatgaactgtgt 2053 Query: 823 catactattattatgttnttccaaacttgtctggccatgctttccgcagtcttcttcc-a 881 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 2052 catactattattatgtt-ttccaaacttgtctggccatgctttccgcagtcttctcccaa 1994 Query: 882 agacactaaattgaggaatatttaactcattagctctgtgtngccag-acatnccanatg 940 |||||||||||||||||||||||||||||| |||||||||| ||||| |||| | | ||| Sbjct: 1993 agacactaaattgaggaatatttaactcataagctctgtgt-gccagaacatccaagatg 1935 Query: 941 acaccttc 948 |||||||| Sbjct: 1934 acaccttc 1927 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7711 Number of Sequences: 1807 Number of extensions: 7711 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 949 length of database: 10,358,551 effective HSP length: 16 effective length of query: 933 effective length of database: 10,329,639 effective search space: 9637553187 effective search space used: 9637553187 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)