BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZD05FM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig833 1449 0.0 >3x_Contig833 Length = 3148 Score = 1449 bits (731), Expect = 0.0 Identities = 826/847 (97%), Gaps = 8/847 (0%) Strand = Plus / Plus Query: 86 tggaattctgaaccgattaactgaggattgaataaaatctctggcgctctgaatttctca 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 897 tggaattctgaaccgattaactgaggattgaataaaatctctggcgctctgaatttctca 956 Query: 146 ttatcaagttcaatctgtttcccatctggcagtctgaacattgtttgttttccgtgcatt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 957 ttatcaagttcaatctgtttcccatctggcagtctgaacattgtttgttttccgtgcatt 1016 Query: 206 gtgtagtttttctcttcttctttcggatccaatgctatatagcacgctttctctttgatg 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1017 gtgtagtttttctcttcttctttcggatccaatgctatatagcacgctttctctttgatg 1076 Query: 266 attcgaacgatctctctttcgctactcgaaagcaaggaaaccccagtggactttcgtata 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1077 attcgaacgatctctctttcgctactcgaaagcaaggaaaccccagtggactttcgtata 1136 Query: 326 ag-aacttgcaaaag-ttctgatatatcacgaccagctatatcaatccttcgtatagctg 383 || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1137 agcaacttgcaaaagcttctgatatatcacgaccagctatatcaatccttcgtatagctg 1196 Query: 384 atggtaatgtgtaaccatcgtaaactggaactgcgtgtgaacaaccatcaccggaatcca 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1197 atggtaatgtgtaaccatcgtaaactggaactgcgtgtgaacaaccatcaccggaatcca 1256 Query: 444 atacgcatcctgttgttcgcccactggcgtatagcgaaagcactgcctgaatcgatacat 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1257 atacgcatcctgttgttcgcccactggcgtatagcgaaagcactgcctgaatcgatacat 1316 Query: 504 ataccgcaggtacactaaaagtttcgaataataactcgcacatctgttctctattctttt 563 ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1317 ataccgcagaacaattaaaagtttcgaataataactcgcacatctgttctctattctttt 1376 Query: 564 tgggattcaatggtgcctcagtgaccaacaccggatgatcttgcaaactgctcagctgta 623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1377 tgggattcaatggtgcctcagtgaccaacaccggatgatcttgcaaactgctcagctgta 1436 Query: 624 atcctttttcgaaaacatgcccccatagctgctccaatgcattccaatctgtcacaacgc 683 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1437 atcctttttcgaaaacatgcccccatagctgctccaatgcattccaatctgtcacaacgc 1496 Query: 684 catgttctaaaggatggcgtagctttaaaagaccccgtatttcctgtgcttggtttccaa 743 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 1497 catgttctaaaggatggcgta-cttcaaaagaccccgtatttcctgtgcttggtttccaa 1555 Query: 744 cgaaagtattcccatcgaatcttccagccataactttactatatttaggtatccccacca 803 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1556 cgaaagtattcccatcgaatcttccagccataactttactatatttaggtatccccacca 1615 Query: 804 aagaatgttcataacatttaggtttatctttcaccttcaaaacccgcccttttttagccc 863 |||||||||||||||||||||||||||| ||||||| |||| |||| ||||| ||||||| Sbjct: 1616 aagaatgttcataacatttaggtttatc-ttcacctccaaaccccg-cctttattagccc 1673 Query: 864 agtacccattgtctataactattagtttgattgaacaatatcttatcttttggaattcat 923 || |||||||||||| ||||| ||| ||||||||||||||||| ||| |||||||| ||| Sbjct: 1674 ag-acccattgtctagaacta-taggttgattgaacaatatctcatc-tttggaatccat 1730 Query: 924 caccgtt 930 ||||||| Sbjct: 1731 caccgtt 1737 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6190 Number of Sequences: 1807 Number of extensions: 6190 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)