BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZD06FM1.SCF screened BAC_end (954 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1294 1606 0.0 >3x_Contig1294 Length = 6938 Score = 1606 bits (810), Expect = 0.0 Identities = 852/864 (98%), Gaps = 2/864 (0%) Strand = Plus / Minus Query: 88 attagccactgtattctttcttctccaatgggttaatgctaataaatatgtacagataca 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5924 attagccactgtattctttcttctccaatgggttaatgctaataaatatgtacagataca 5865 Query: 148 tactaaaagttacaaattcaataactcaacgcaggttgaagttatccattattagtttcg 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5864 tactaaaagttacaaattcaataactcaacgcaggttgaagttatccattattagtttcg 5805 Query: 208 ggatacagagcaccccatttatctcatcatctatcaattttagagcggatattcccatca 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5804 ggatacagagcaccccatttatctcatcatctatcaattttagagcggatattcccatca 5745 Query: 268 tgctatgatatatatcagggtcatcttgatcattcttggcaaatccacccaccatcttat 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5744 tgctatgatatatatcagggtcatcttgatcattcttggcaaatccacccaccatcttat 5685 Query: 328 tctgagtttgattcagtaaataatctcgtatcagtggaacatcaataagctgactccaac 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5684 tctgagtttgattcagtaaataatctcgtatcagtggaacatcaataagctgactccaac 5625 Query: 388 gttggggctctaagattcttaaagaatttaaacaccaaaacgcgtagcacgtatccgcaa 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5624 gttggggctctaagattcttaaagaatttaaacaccaaaacgcgtagcacgtatccgcaa 5565 Query: 448 gtttattttctctcccgttaaacccacctgagtcatccggatcgtaatcgtcgtttaaat 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5564 gtttattttctctcccgttaaacccacctgagtcatccggatcgtaatcgtcgtttaaat 5505 Query: 508 cctgttcaacaaagacaccaatagcagaaacctgtctgttcaccaaccaatgaagagtat 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5504 cctgttcaacaaagacaccaatagcagaaacctgtctgttcaccaaccaatgaagagtat 5445 Query: 568 cctgcctaaacgaggcaggaatgttttgtagttgatttagtagagatagagcagataacg 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5444 cctgcctaaacgaggcaggaatgttttgtagttgatttagtagagatagagcagataacg 5385 Query: 628 cgcatgatgtgtatccaccgtgtggctcgttccagtcaccaaatccccccattgtgcact 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 5384 cgcatgatgtgtatccaccgtgtggctcgttccagtcaccaaatccccccattgtg-act 5326 Query: 688 gacgtgacatgatatattgtagcagcttagaaacgttaatataccgagagaaatccgatt 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5325 gacgtgacatgatatattgtagcagcttagaaacgttaatataccgagagaaatccgatt 5266 Query: 748 ctgatcgacatccgataagatataggatcgatactgcaatantacagaacctcagatcat 807 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 5265 ctgatcgacatccgataagatataggatcgatactgcaatataacagaacctcagatcat 5206 Query: 808 gggaatcgaacttcgatggatatccagcattattcagaaaagaagttaatgacccatcag 867 ||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||| Sbjct: 5205 gggaatcgaacttcgatggatatccagcattatccagaaaagaggtaaatgacccatcag 5146 Query: 868 gttactgacnagatgagatgaatttgcccaacgtataacggttcaacttttcatcaaaga 927 || |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 5145 gtaactgacaagatgagatgaatttgcccaacgtatcacggttcaacttctcatcaaaga 5086 Query: 928 atttgtgatccccc-acaacataa 950 ||| |||||||||| ||||||||| Sbjct: 5085 attcgtgatcccccaacaacataa 5062 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6539 Number of Sequences: 1807 Number of extensions: 6539 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 954 length of database: 10,358,551 effective HSP length: 16 effective length of query: 938 effective length of database: 10,329,639 effective search space: 9689201382 effective search space used: 9689201382 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)