BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZD09RM1.SCF screened BAC_end (956 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1551 1685 0.0 >3x_Contig1551 Length = 9073 Score = 1685 bits (850), Expect = 0.0 Identities = 890/901 (98%), Gaps = 2/901 (0%) Strand = Plus / Minus Query: 44 gcttcgagagggatagcgaacatatttttggtggaaaagtctgacagaatttcaggtaaa 103 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 3075 gcttcgagagggatagcgaacatatctttggtggaaaagtctgacagaatttcaggtaaa 3016 Query: 104 aaaaaatgaagacaaggtaaaaataaagaatggtatgccagattaacaaacacactaaaa 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3015 aaaaaatgaagacaaggtaaaaataaagaatggtatgccagattaacaaacacactaaaa 2956 Query: 164 tacagtgagagaagcaacttatagacataagttatattaggtaattcaccatgctttatt 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 2955 tacagtgagagaagcaacttatagacataagttatattaggtaattcaccatgcactaat 2896 Query: 224 atctttcgaattcaaagttcaatactgaaattccatgtcactgtccgcatgagaactggg 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2895 atctttcgaattcaaagttcaatactgaaattccatgtcactgtccgcatgagaactggg 2836 Query: 284 caacagcgtgattacgcaacgtaagttaatttgtatctcaaggtatggcagagccttctt 343 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2835 caacagcgtgattacgcaacgtaagtcaatttgtatctcaaggtatggcagagccttctt 2776 Query: 344 atacttctcttaatacaactgtaaaacatacatcattttatcagattaactagagaagag 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2775 atacttctcttaatacaactgtaaaacatacatcattttatcagattaactagagaagag 2716 Query: 404 ccatgaaacagtcataataatatacataatataaagtaacagaaacgaagaaaaagtcat 463 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2715 ccatgcaacagtcataataatatacataatataaagtaacagaaacgaagaaaaagtcat 2656 Query: 464 aaaactgataaaaccgttaagttagttctatcatttagttttgaactacgcaaagaacgt 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2655 aaaactgataaaaccgttaagttagttctatcatttagttttgaactacgcaaagaacgt 2596 Query: 524 tgaaaattcatcatcaaacatgtcaagcgcagaatcaagaaatagatcgttatccctaat 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2595 tgaaaattcatcatcaaacatgtcaagcgcagaatcaagaaatagatcgttatccctaat 2536 Query: 584 gccataaggaagtgcattcatatcgagaatatgtgattcttgattggtgggtggcaatga 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2535 gccataaggaagtgcattcatatcgagaatatgtgattcttgattggtgggtggcaatga 2476 Query: 644 ccagtcaaatgcctggataatgctagtggaaaactcgtccgatacaataaacaagtatga 703 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2475 ccagtcaaatgcctggataatgctagtggaaaactcgtccgatacaataaacaagtatga 2416 Query: 704 ttgattgagtaagttgtctaattccaacccacgttcatttttgaaggtgtcatgaaccaa 763 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2415 ttgattgagtaagttgtctaattccaacccacgttcatttttgaaggtgtcatgaaccaa 2356 Query: 764 tttgaaatacctggtagctaaaacggcattaaatgacacgtcggtgtcagtttgcaaata 823 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2355 tttgaaatacctgtaagctaaaacggcattaaatgacacgtcggtgtcagtttgcaaata 2296 Query: 824 cgtatcanacgtagcaatgaatttctgaagatctacatcactggacacaacggccgaccc 883 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2295 cgtatcaaacgtagcaatgaatttctgaagatctacatcactggacacaacggccgaccc 2236 Query: 884 atcgtctt-acgattcatgtatgcatcagaaaatat-agaacgagctcatgtgtgactct 941 |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2235 atcgtcttcacgattcatgtatgcatcagaaaatataagaacgagctcatgtgtgactct 2176 Query: 942 c 942 | Sbjct: 2175 c 2175 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7683 Number of Sequences: 1807 Number of extensions: 7683 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 956 length of database: 10,358,551 effective HSP length: 16 effective length of query: 940 effective length of database: 10,329,639 effective search space: 9709860660 effective search space used: 9709860660 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)