BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZE02FM1.SCF screened BAC_end (920 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1511 1544 0.0 >3x_Contig1511 Length = 8569 Score = 1544 bits (779), Expect = 0.0 Identities = 812/819 (99%), Gaps = 3/819 (0%) Strand = Plus / Minus Query: 86 caaatcaacattcgcattctgtttcctaatttcgattttcgcttggatttcttgcggagt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7385 caaatcaacattcgcattctgtttcctaatttcgattttcgcttggatttcttgcggagt 7326 Query: 146 aatcaaggaatacaaactacatacctcgatggaacgcaaatagtgatgtggaccaccgtt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7325 aatcaaggaatacaaactacatacctcgatggaacgcaaatagtgatgtggaccaccgtt 7266 Query: 206 gcaatttttcaccttcaacattgttggagaactaacatatagatacagagatattcataa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7265 gcaatttttcaccttcaacattgttggagaactaacatatagatacagagatattcataa 7206 Query: 266 cctactctaacaaaaatgctccgaaacgcacgaaaactattcttcctaactttttttttc 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7205 cctactctaacaaaaatgctccgaaacgcacgaaaactattcttcctaactttttttttc 7146 Query: 326 ctatctgtataattgaaagtaccctgatcaacgttaagccagccaaactatcgcccgtaa 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7145 ctatctgtataattgaaagtaccctgatcaacgttaagccagccaaactatcgcccgtaa 7086 Query: 386 atcttatgttagtttattcatgcatagcactagacataacaatttgacggtccatgtcaa 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7085 atcttatgttagtttattcatgcatagcactagacataacaatttgacggtccatgtcaa 7026 Query: 446 aaaacgaatcaactccaaaaggaacaggttttagtgtatacagtgcaggtgcagtagtgc 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7025 aaaacgaatcaactccaaaaggaacaggttttagtgtatacagtgcaggtgcagtagtgc 6966 Query: 506 agtagtgcatctaagctcaacaaaaactttaaaatttcctaagctgatgttttttcttgt 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6965 agtagtgcatctaagctcaacaaaaactttaaaatttcctaagctgatgttttttcttgt 6906 Query: 566 tttgtactgacttgttagtaagaaaaaaaataactaccggaaggttttgctttgccagct 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6905 tttgtactgacttgttagtaagaaaaaaaataactaccggaaggttttgctttgccagct 6846 Query: 626 tctttgcaactcaagtgcagatcgggggggggggcgtaaatcctacacccctcctgatat 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6845 tctttgcaactcaagtgcagatcgggggggggggcgtaaatcctacacccctcctgatat 6786 Query: 686 ctcatacgcccacggtccacttcagcagttctacgttggatcaaaaatcagagagagctg 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6785 ctcatacgcccacggtccacttcagcagttctacgttggatcaaaaatcagagagagctg 6726 Query: 746 caaatcaaatctcgtcatgcactttcaagggagactagacttgacctgaccagtgtattg 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6725 caaatcaaatctcgtcatgcactttcaagggagactagacttgacctgaccagtgtattg 6666 Query: 806 acccaaagcggttttagaagaaggcattactcttgaaggtatttacaaaaacaactctcg 865 ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 6665 acccaaagcgg-tttagaagaaggcattactctgaaaggtatttacaaaaacaactctcg 6607 Query: 866 ccatgtattatagcgggaaagaacttctaacggcgcgaa 904 ||||||| || |||||||||| || |||||||||||||| Sbjct: 6606 ccatgta-taaagcgggaaag-acctctaacggcgcgaa 6570 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7609 Number of Sequences: 1807 Number of extensions: 7609 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 920 length of database: 10,358,551 effective HSP length: 16 effective length of query: 904 effective length of database: 10,329,639 effective search space: 9337993656 effective search space used: 9337993656 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)