BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZE06RM1.SCF screened BAC_end (944 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1654 1592 0.0 >3x_Contig1654 Length = 17174 Score = 1592 bits (803), Expect = 0.0 Identities = 878/898 (97%), Gaps = 4/898 (0%) Strand = Plus / Minus Query: 49 tgattttgatatcaataaacgtcgattcgaagcctgctgcctttattaaattatcacgtt 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7237 tgattttgatatcaataaacgtcgattcgaagcctgctgcctttattaaattatcacgtt 7178 Query: 109 cttcagctgtcaaatccatattatccaagagaaattttaggatattgctgacatcgttag 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7177 cttcagctgtcaaatccatattatccaagagaaattttaggatattgctgacatcgttag 7118 Query: 169 aaatgttttcattatgttgtaggtaatcattgacctcctccaacattgtttcttactcat 228 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 7117 aaatgttttcattatgttgtaggtaatcattgacctcctccaacattgtttcgtactcat 7058 Query: 229 ccttatttcgtactaattcttctttcaatctgattaactctttattcttgtcctccaatg 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7057 ccttatttcgtactaattcttctttcaatctgattaactctttattcttgtcctccaatg 6998 Query: 289 tgattactagttttacattctgctctcgaagtaaaggagaatcttcgacctcttcgatgt 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6997 tgattactagttttacattctgctctcgaagtaaaggagaatcttcgacctcttcgatgt 6938 Query: 349 tggtatttgcatgactctcaaaatcgtttgtaatgttttctgtattttgggtagcctgca 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6937 tggtatttgcatgactctcaaaatcgtttgtaatgttttctgtattttgggtagcctgca 6878 Query: 409 atttttgatcgttattgaaattaacttgctttaagatctcggtcaaggccttaactttca 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6877 atttttgatcgttattgaaattaacttgctttaagatctcggtcaaggccttaactttca 6818 Query: 469 ctctgtactgtaccaattgtctctttaaaacatcagtttcactagtcatcaaatgcgaat 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6817 ctctgtactgtaccaattgtctctttaaaacatcagtttcactagtcatcaaatgcgaat 6758 Query: 529 ctgctatattaggtggataaaagtcatttatggtcccacgctgcaaccgttgtgtagata 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6757 ctgctatattaggtggataaaagtcatttatggtcccacgctgcaaccgttgtgtagata 6698 Query: 589 cctttcttgaatcattcggaaaccgatatttttcatgtgtatcattatttcttccaatta 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6697 cctttcttgaatcattcggaaaccgatatttttcatgtgtatcattatttcttccaatta 6638 Query: 649 cagcaggaaccctaccatcttccttaatccaccgattatcgctgcttatcaattggaaaa 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6637 cagcaggaaccctaccatcttccttaatccaccgattatcgctgcttatcaattggaaaa 6578 Query: 709 tatctccactactgatcaccgtatcagtctcttgagtagtattatcagtcgtagtttctt 768 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 6577 tatctccactactgatcaccgtatcagtctctgaggtagtattatcagtcgtagtttctt 6518 Query: 769 cttcgtcctcctcgctcaccgcagatttgatccgcctccgcacatttacataatatttat 828 ||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||| Sbjct: 6517 cttcgtcctcctcgctcaccgcagaattgatccgcctcggcacattacaataatatttat 6458 Query: 829 tcacataatcatctttgctagtatcaatagccaatttggtttgcactaccatcatactct 888 |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 6457 tcacataatcatctttgctagtatcaatag-caatttggttgcaactaccatcatactct 6399 Query: 889 tggtgnctctc-tttttgccggactct-acttcaatttcagattgtc-tccgtatcta 943 || || ||||| ||||||||||||||| ||| |||||||||||||| |||||||||| Sbjct: 6398 tgttgtctctcttttttgccggactctaactcaaatttcagattgtcatccgtatcta 6341 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7340 Number of Sequences: 1807 Number of extensions: 7340 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 944 length of database: 10,358,551 effective HSP length: 16 effective length of query: 928 effective length of database: 10,329,639 effective search space: 9585904992 effective search space used: 9585904992 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)