BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZE08FM1.SCF screened BAC_end (917 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig611 1606 0.0 >3x_Contig611 Length = 2628 Score = 1606 bits (810), Expect = 0.0 Identities = 825/829 (99%), Gaps = 1/829 (0%) Strand = Plus / Plus Query: 89 tcgtatggtaaaaataaagtcataaattgtaagtgtctgtaaaacaagccaaggagttca 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 934 tcgtatggtaaaaataaagtcataaattgtaagtgtctgtaaaacaagccaaggagttca 993 Query: 149 agttctgcctcattttgtttaagcatgtccttcttatatagacaagaatattcttcccag 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 994 agttctgcctcattttgtttaagcatgtccttcttatatagacaagaatattcttcccag 1053 Query: 209 ccatttttttggtccataattccaggaatagcctgtacatttgcagtggatttctgaggt 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 ccatttttttggtccataattccaggaatagcctgtacatttgcagtggatttctgaggt 1113 Query: 269 gttctacccttgactgtaatttcaaatcttgatattagacaataacataaccataatcgt 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1114 gttctacccttgactgtaatttcaaatcttgatattagacaataacataaccataatcgt 1173 Query: 329 cttctataatttttatacctaggatcaattctcatgtttccagtcggttcaagaaattgt 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1174 cttctataatttttatacctaggatcaattctcatgtttccagtcggttcaagaaattgt 1233 Query: 389 gatggatccctatcaagacccagatcagaaaccaaaggtcccatcatgccaataacacct 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1234 gatggatccctatcaagacccagatcagaaaccaaaggtcccatcatgccaataacacct 1293 Query: 449 tcggatgttgaatcgtagaatatactacataggtcaggttgatgagcaaggatgttccaa 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1294 tcggatgttgaatcgtagaatatactacataggtcaggttgatgagcaaggatgttccaa 1353 Query: 509 agcagcatgtgccaagaaataacttcttcagttcttgactgatagatgttcaatatcgac 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1354 agcagcatgtgccaagaaataacttcttcagttcttgactgatagatgttcaatatcgac 1413 Query: 569 actaattcagcggcagaagatgttaattttttctccagttctgcaaacccttcgatccaa 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1414 actaattcagcggcagaagatgttaattttttctccagttctgcaaacccttcgatccaa 1473 Query: 629 gccctgtcgccatcgtatttatgttgaacatcctgttccatagccctttgatcgaaaagc 688 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1474 gccctgtcgccatcgtatttatgttgaacatcctgttccatagccctttgatcgaaaagc 1533 Query: 689 cgtagtttccaatgtgatatggatagttgaagtattagataaagaatagagatgttcact 748 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1534 cgtagtttccaatgtgatatggatagttgaagtattagataaagaatagagatgttcact 1593 Query: 749 aacttcattttgatattagtggtaccgggattcactattatccgctctggattatgtgaa 808 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1594 aacttcattttgatattagtggtaccgggattcactattatccgctctggattatgtgaa 1653 Query: 809 tccatgtggatcacttcgtttagattttctttanagagatcgatatcgatacatggccat 868 |||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| Sbjct: 1654 tccatgtggatcacttcgttaagattttcttcaaagagatcgatatcgatacatggccat 1713 Query: 869 atcgggttaaatgtggtggtagaagttatccaaaagtagtctaatattg 917 |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1714 atcggg-taaatgtggtggtagaagttatccaaaagtagtctaatattg 1761 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6341 Number of Sequences: 1807 Number of extensions: 6341 Number of successful extensions: 28 Number of sequences better than 1.0e-20: 1 length of query: 917 length of database: 10,358,551 effective HSP length: 16 effective length of query: 901 effective length of database: 10,329,639 effective search space: 9307004739 effective search space used: 9307004739 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)