BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC14ZE12FM1.SCF screened BAC_end
         (940 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1652                                                        1503   0.0  

>3x_Contig1652 
          Length = 14842

 Score = 1503 bits (758), Expect = 0.0
 Identities = 817/833 (98%), Gaps = 3/833 (0%)
 Strand = Plus / Plus

                                                                        
Query: 83   ctctttctcgattaagttccgccatgtgttgaagttgttgcaaatactgcggatctacgt 142
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7644 ctctttctcgattaagttccgccatgtgttgaagttgttgcaaatactgcggatctacgt 7703

                                                                        
Query: 143  aatcttccttgtattttagcatactttctggccacgttaaggttaaattatagatgggca 202
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7704 aatcttccttgtattttagcatactttctggccacgttaaggttaaattatagatgggca 7763

                                                                        
Query: 203  aatattcatctttttttt-ccatggggcacccatcttagttgaagcacgacgcaacgtta 261
            |||||||||||||      |||||||||||||||||||||||||||||||||||||||||
Sbjct: 7764 aatattcatctttcacacaccatggggcacccatcttagttgaagcacgacgcaacgtta 7823

                                                                        
Query: 262  tcttacagaaacatttaatcaaatgcttagtgaaacatgatctatcacgataaatctgat 321
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7824 tcttacagaaacatttaatcaaatgcttagtgaaacatgatctatcacgataaatctgat 7883

                                                                        
Query: 322  cctcatcggcaacgattgaagtactaccttgtgcttcctgtaacatatattttgcatggg 381
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7884 cctcatcggcaacgattgaagtactaccttgtgcttcctgtaacatatattttgcatggg 7943

                                                                        
Query: 382  caggaaccaattcttgccttgtatctctatctataactgcattaaactgagccttttctt 441
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7944 caggaaccaattcttgccttgtatctctatctataactgcattaaactgagccttttctt 8003

                                                                        
Query: 442  tgataatgtaaattttttgatgctgtgatccatgtgagtgctgatgatgtttttcagcat 501
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8004 tgataatgtaaattttttgatgctgtgatccatgtgagtgctgatgatgtttttcagcat 8063

                                                                        
Query: 502  cgtcatgtgaggaatcttgcttacttttccgtaggtataccgtttctccagggaaatagt 561
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8064 cgtcatgtgaggaatcttgcttacttttccgtaggtataccgtttctccagggaaatagt 8123

                                                                        
Query: 562  cgtttttaaatcttgcatatacctgttcgacgagcatatctagccttctaatctcgttga 621
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8124 cgtttttaaatcttgcatatacctgttcgacgagcatatctagccttctaatctcgttga 8183

                                                                        
Query: 622  aatggatgaattttgcaacaggttcacgtaattttaaagggaacattttctcaacgtatt 681
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8184 aatggatgaattttgcaacaggttcacgtaattttaaagggaacattttctcaacgtatt 8243

                                                                        
Query: 682  ggaactgctcttcttcactgttcaacgcttcaaaaaaagttaaacatgatgtaccagtga 741
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8244 ggaactgctcttcttcactgttcaacgcttcaaaaaaagttaaacatgatgtaccagtga 8303

                                                                        
Query: 742  tctcacaggtgaaataatgtcgcctataaaaatccaatcgttgcaaaaactctgcataag 801
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8304 tctcacaggtgaaataatgtcgcctataaaaatccaatcgttgcaaaaactctgcataag 8363

                                                                        
Query: 802  tcaaaaaccatt-ccctgtcttttg-atgtaccatattttcctattgatatttgacggta 859
            |||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 8364 tcaaaaaccattcccctgtctcttgaatgtaccatattttcctattgatatttgacggta 8423

                                                                 
Query: 860  attggctaccatctggncacgttttcgttttccttttatacaaaacaattgct 912
            || | ||| |||||||  ||||| |||||||||||||||||||||| ||||||
Sbjct: 8424 atggcctagcatctggcaacgttatcgttttccttttatacaaaaccattgct 8476


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7030
Number of Sequences: 1807
Number of extensions: 7030
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 940
length of database: 10,358,551
effective HSP length: 16
effective length of query: 924
effective length of database: 10,329,639
effective search space: 9544586436
effective search space used: 9544586436
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)