BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZF10RM1.SCF screened BAC_end (911 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1346 1643 0.0 >3x_Contig1346 Length = 6154 Score = 1643 bits (829), Expect = 0.0 Identities = 859/865 (99%), Gaps = 3/865 (0%) Strand = Plus / Minus Query: 48 ctaaatttgttggaccatcaatca-ttctagcgtacttgccatacaactcagaaagagac 106 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 6049 ctaaatttgttggaccgtcaatcaattctagcgtacttgccatacaactcagaaagagac 5990 Query: 107 actccactagaagttttaaaagaaaccaaaattggtgtcgaaagtggttactggccttta 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 5989 actccactagaagttttaaaagaaaccaaaattggtgtcgaaagtggttactggccgtta 5930 Query: 167 tacaggtttaacccttacgaagaacgcgacgaccaagttttcaaattggactcctctgtt 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5929 tacaggtttaacccttacgaagaacgcgacgaccaagttttcaaattggactcctctgtt 5870 Query: 227 atcaaacaacaactgaaggactttttagaccgagagaataagctcactcttctagctcaa 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5869 atcaaacaacaactgaaggactttttagaccgagagaataagctcactcttctagctcaa 5810 Query: 287 aagtccccagagcttgccagaaatttgaagcattccgcctcagatgcgattcaattgaaa 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5809 aagtccccagagcttgccagaaatttgaagcattccgcctcagatgcgattcaattgaaa 5750 Query: 347 caagacagaagggctaaagcagcattcgatcaactcttagaaggtctctctggccctcct 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5749 caagacagaagggctaaagcagcattcgatcaactcttagaaggtctctctggccctcct 5690 Query: 407 cttcacatttatcatgcttctgacggtggcaatgcagctaatttagcaaaaagattgggt 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5689 cttcacatttatcatgcttctgacggtggcaatgcagctaatttagcaaaaagattgggt 5630 Query: 467 acaagggcatctgctagaggtctaaaaactattgtactatcaatggaagacattgttcta 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5629 acaagggcatctgctagaggtctaaaaactattgtactatcaatggaagacattgttcta 5570 Query: 527 gaagagttaccaggtgaagagaatgttgtatttataacgtcaactgctggtcaaggtgaa 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5569 gaagagttaccaggtgaagagaatgttgtatttataacgtcaactgctggtcaaggtgaa 5510 Query: 587 ttccctcaagatggtaaggcattttgggatgctctgaagtcttctactgacctcgattta 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5509 ttccctcaagatggtaaggcattttgggatgctctgaagtcttctactgacctcgattta 5450 Query: 647 gcttctttgaatttctccgtgtttggtttaggtgactctgcatactggccacgtaaggaa 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5449 gcttctttgaatttctccgtgtttggtttaggtgactctgcatactggccacgtaaggaa 5390 Query: 707 gacgcccattactacaacaaacccgctaaggatttgttcaagagattagaattgctttct 766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5389 gacgcccattactacaacaaacccgctaaggatttgttcaagagattagaattgctttct 5330 Query: 767 ggtcaagaactagtttctttgggattgggtgatgaccaggatgccgatggttatcaaaca 826 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5329 ggtcaagaactagtttctttgggattgggtgatgaccaggatgccgatggttatcaaaca 5270 Query: 827 ggctatgctgtgtgggaagctcagctctgggagaaacttnggtgttttc-gtgcaactgt 885 ||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||| Sbjct: 5269 ggctatgctgtgtgggaagctcagctctgggagaaactt-ggtgtttccggtgcaactgt 5211 Query: 886 ccctgatgaaccaaagccgatcacc 910 ||||||||||||||||||||||||| Sbjct: 5210 ccctgatgaaccaaagccgatcacc 5186 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5801 Number of Sequences: 1807 Number of extensions: 5801 Number of successful extensions: 38 Number of sequences better than 1.0e-20: 1 length of query: 911 length of database: 10,358,551 effective HSP length: 16 effective length of query: 895 effective length of database: 10,329,639 effective search space: 9245026905 effective search space used: 9245026905 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)