BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZF12RM1.SCF screened BAC_end (947 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1346 1594 0.0 >3x_Contig1346 Length = 6154 Score = 1594 bits (804), Expect = 0.0 Identities = 882/905 (97%), Gaps = 3/905 (0%) Strand = Plus / Minus Query: 43 cttctaaatttgttggaccattattca-ttctagcgtacttgccatacaactcagaaaga 101 ||||||||||||||||||| | | ||| |||||||||||||||||||||||||||||||| Sbjct: 6052 cttctaaatttgttggaccgtcaatcaattctagcgtacttgccatacaactcagaaaga 5993 Query: 102 gacactccactagaagttttaaaagaaaccaaaattggtgtcgaaagtggttactggcct 161 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5992 gacactccactagaagttttaaaagaaaccaaaattggtgtcgaaagtggttactggccg 5933 Query: 162 ttatacatgtttaacccttacgaagaacgcgacgaccaagttttcaaattggtcncttcn 221 ||||||| |||||||||||||||||||||||||||||||||||||||||||| | | || Sbjct: 5932 ttatacaggtttaacccttacgaagaacgcgacgaccaagttttcaaattggactcctct 5873 Query: 222 gttatcaaacaacaactgaaggactttttagaccgagagaataagctcactcttctagct 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5872 gttatcaaacaacaactgaaggactttttagaccgagagaataagctcactcttctagct 5813 Query: 282 caaaagtccccagagcttgccagaaatttgaagcattccgcctcagatgcgattcaattg 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5812 caaaagtccccagagcttgccagaaatttgaagcattccgcctcagatgcgattcaattg 5753 Query: 342 aaacaagacagaagggctaaagcagcattcgatcaactcttagaaggtctctctggccct 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5752 aaacaagacagaagggctaaagcagcattcgatcaactcttagaaggtctctctggccct 5693 Query: 402 cctcttcacatttatcatgcttctgacggtggcaatgcagctaatttagcaaaaagattg 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5692 cctcttcacatttatcatgcttctgacggtggcaatgcagctaatttagcaaaaagattg 5633 Query: 462 ggtacaagggcatctgctagaggtctaaaaactattgtactatcaatggaagacattgtt 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5632 ggtacaagggcatctgctagaggtctaaaaactattgtactatcaatggaagacattgtt 5573 Query: 522 ctagaagagttaccaggtgaagagaatgttgtatttataacgtcaactgctggtcaaggt 581 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5572 ctagaagagttaccaggtgaagagaatgttgtatttataacgtcaactgctggtcaaggt 5513 Query: 582 gaattccctcaagatggtaaggcattttgggatgctctgaagtcttctactgacctcgat 641 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5512 gaattccctcaagatggtaaggcattttgggatgctctgaagtcttctactgacctcgat 5453 Query: 642 ttagcttctttgaatttctccgtgtttggtttaggtgactctgcatactggccacgtaag 701 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5452 ttagcttctttgaatttctccgtgtttggtttaggtgactctgcatactggccacgtaag 5393 Query: 702 gaagacgcccattactacaacanacccgcttaggatttgttcaagagattagaattgctt 761 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 5392 gaagacgcccattactacaacaaacccgctaaggatttgttcaagagattagaattgctt 5333 Query: 762 tctggtcaagaactagtttctttgggattgggtgatgaccaggatgccgatgtttatcaa 821 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 5332 tctggtcaagaactagtttctttgggattgggtgatgaccaggatgccgatggttatcaa 5273 Query: 822 acaggctatgctgtgtgggaagctcagctctgggagaaacttgttgtttccgttgcaact 881 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 5272 acaggctatgctgtgtgggaagctcagctctgggagaaacttggtgtttccggtgcaact 5213 Query: 882 gtccttgatg-acccaagccgatcaccattgaagatat-taaattgctttcaaattcctc 939 |||| ||||| ||| ||||||||||||| ||||||||| ||||||||| ||| |||||| Sbjct: 5212 gtccctgatgaaccaaagccgatcaccaatgaagatatcaaaattgcttccaatttcctc 5153 Query: 940 agaga 944 ||||| Sbjct: 5152 agaga 5148 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6627 Number of Sequences: 1807 Number of extensions: 6627 Number of successful extensions: 36 Number of sequences better than 1.0e-20: 1 length of query: 947 length of database: 10,358,551 effective HSP length: 16 effective length of query: 931 effective length of database: 10,329,639 effective search space: 9616893909 effective search space used: 9616893909 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)