BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZG04FM1.SCF screened BAC_end (898 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig361 490 e-138 3x_Contig1219 369 e-102 >3x_Contig361 Length = 1383 Score = 490 bits (247), Expect = e-138 Identities = 281/290 (96%), Gaps = 2/290 (0%) Strand = Plus / Minus Query: 608 caccatttcaactggatatccttcgtaaacttgtttgcgtccttgacggttctgtcatat 667 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1370 caccatttcaactggatatccttcgtaaacttgtttgcgtccttgacggttctgtcatat 1311 Query: 668 gcttcataaaacgcgacagcctcggaagagtaatttgaaagatcccgttcactcttagca 727 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1310 gcttcataaaacgcgaca-cctcggaagagtaatttgaaagatcccgttcactcttagca 1252 Query: 728 ctgctaggcgggttatccactttgggtatgctgacttgctgcgccggtggtggttgtcgt 787 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1251 ctgctaggcgggttatccactttgggtatgctgacttgctgcgccggtggtggttgtcgt 1192 Query: 788 gatactggcgtcgttaccgttgactgggaggcttgtcttgnatctttctcatacatttgg 847 |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 1191 gatactggcgtcgttaccgttgactgggagctttgtcttgtatctttctcatacatttgg 1132 Query: 848 gatggaatattcgtatcttgcacatgattctgggggcagatcatcaaccg 897 ||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 1131 tatggaatattcgtatctgcaacatgattct-ggggcagatcatcaaccg 1083 >3x_Contig1219 Length = 5018 Score = 369 bits (186), Expect = e-102 Identities = 186/186 (100%) Strand = Plus / Plus Query: 88 tacagggtctcttttgataacgatttcaccagatttcgttctcagtcctttcaaatagaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4833 tacagggtctcttttgataacgatttcaccagatttcgttctcagtcctttcaaatagaa 4892 Query: 148 catcccgagcttgtacatggatacagaatgtccattggtcaaagctgccatttcatagta 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4893 catcccgagcttgtacatggatacagaatgtccattggtcaaagctgccatttcatagta 4952 Query: 208 cttctgtgaaatctttaaagcttcgtattcactcacagttgtgtaatctactccacgtcc 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4953 cttctgtgaaatctttaaagcttcgtattcactcacagttgtgtaatctactccacgtcc 5012 Query: 268 gtactc 273 |||||| Sbjct: 5013 gtactc 5018 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4406 Number of Sequences: 1807 Number of extensions: 4406 Number of successful extensions: 32 Number of sequences better than 1.0e-20: 2 length of query: 898 length of database: 10,358,551 effective HSP length: 16 effective length of query: 882 effective length of database: 10,329,639 effective search space: 9110741598 effective search space used: 9110741598 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)