BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZG04RM1.SCF screened BAC_end (899 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig614 1624 0.0 >3x_Contig614 Length = 2043 Score = 1624 bits (819), Expect = 0.0 Identities = 843/851 (99%) Strand = Plus / Minus Query: 48 tactattctcattgcatctgcatgaacggtagaagatgaaatatcaacttctggtggctg 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1429 tactattctcattgcatctgcatgaacggtagaagatgaaatatcaacttctggtggctg 1370 Query: 108 taacggcactgcagaacccataggaggcttgatagacttcgattgttgttgaaaatgtgg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1369 taacggcactgcagaacccataggaggcttgatagacttcgattgttgttgaaaatgtgg 1310 Query: 168 tagcatcgcagacaattgctgcagtggaagtagattgctcaaagctgggtcacttatagc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1309 tagcatcgcagacaattgctgcagtggaagtagattgctcaaagctgggtcacttatagc 1250 Query: 228 agtcgcaacgatatcagcggtagaattgggcaaagcagtaccacttgtctctgctagcac 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1249 agtcgcaacgatatcagcggtagaattgggcaaagcagtaccacttgtctctgctagcac 1190 Query: 288 ttgcgtagcgctgactttattgccgttgttcatctctgagatagaataaacacattccgt 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1189 ttgcgtagcgctgactttattgccgttgttcatctctgagatagaataaacacattccgt 1130 Query: 348 gctaagtgcgacacattttgaacatggattacctctgtcacatcgagtttttctcctacg 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1129 gctaagtgcgacacattttgaacatggattacctctgtcacatcgagtttttctcctacg 1070 Query: 408 acaagcatagcacacgtatgagactctatttcgcttcataacacgtttgttaccagcatt 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1069 acaagcatagcacacgtatgagactctatttcgcttcataacacgtttgttaccagcatt 1010 Query: 468 gttcttattaacacccacggtactactagagttgttgcttgtattagaacttggtgtcga 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1009 gttcttattaacacccacggtactactagagttgttgcttgtattagaacttggtgtcga 950 Query: 528 cttatctatagtgctaggctgactatgtgaatggctgtgcgaataactctcatcagaagt 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 949 cttatctatagtgctaggctgactatgtgaatggctgtgcgaataactctcatcagaagt 890 Query: 588 aggtgatccacgattattagcctgagaaacggtattccattcctttggtgccatgatcag 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 889 aggtgatccacgattattagcctgagaaacggtattccattcctttggtgccatgatcag 830 Query: 648 atatacaagtcacaatggtacctgtctattcgattgtatacgtgttttttttgtattctg 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 829 atatacaagtcacaatggtacctgtctattcgattgtatacgtgttttttttgtattctg 770 Query: 708 ttagtcgatcgaaaaccaatccatgagtgtgatgagattacttaataagtaaagtaattc 767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 769 ttagtcgatcgaaaaccaatccatgagtgtgatgagattacttaataagtaaagtaattc 710 Query: 768 catatcgatgattctttgtttttatatatatacatacagaaatatcgtagaataagcaag 827 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 709 catatcgatgattctttgtttttatatatatacatacagaataatcgtagaataagcagg 650 Query: 828 gaaaaagctgagaaacctaaaagaaataggtaccaccatctattgcgactattttttttt 887 ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 649 gaaaaagctgagaaacctaaaagaataaggtacaaccatctattgcgactattttttttt 590 Query: 888 aaaataaaaaa 898 | ||| ||||| Sbjct: 589 agaattaaaaa 579 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7508 Number of Sequences: 1807 Number of extensions: 7508 Number of successful extensions: 77 Number of sequences better than 1.0e-20: 1 length of query: 899 length of database: 10,358,551 effective HSP length: 16 effective length of query: 883 effective length of database: 10,329,639 effective search space: 9121071237 effective search space used: 9121071237 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)