BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC14ZG04RM1.SCF screened BAC_end
         (899 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig614                                                         1624   0.0  

>3x_Contig614 
          Length = 2043

 Score = 1624 bits (819), Expect = 0.0
 Identities = 843/851 (99%)
 Strand = Plus / Minus

                                                                        
Query: 48   tactattctcattgcatctgcatgaacggtagaagatgaaatatcaacttctggtggctg 107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1429 tactattctcattgcatctgcatgaacggtagaagatgaaatatcaacttctggtggctg 1370

                                                                        
Query: 108  taacggcactgcagaacccataggaggcttgatagacttcgattgttgttgaaaatgtgg 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1369 taacggcactgcagaacccataggaggcttgatagacttcgattgttgttgaaaatgtgg 1310

                                                                        
Query: 168  tagcatcgcagacaattgctgcagtggaagtagattgctcaaagctgggtcacttatagc 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1309 tagcatcgcagacaattgctgcagtggaagtagattgctcaaagctgggtcacttatagc 1250

                                                                        
Query: 228  agtcgcaacgatatcagcggtagaattgggcaaagcagtaccacttgtctctgctagcac 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1249 agtcgcaacgatatcagcggtagaattgggcaaagcagtaccacttgtctctgctagcac 1190

                                                                        
Query: 288  ttgcgtagcgctgactttattgccgttgttcatctctgagatagaataaacacattccgt 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1189 ttgcgtagcgctgactttattgccgttgttcatctctgagatagaataaacacattccgt 1130

                                                                        
Query: 348  gctaagtgcgacacattttgaacatggattacctctgtcacatcgagtttttctcctacg 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1129 gctaagtgcgacacattttgaacatggattacctctgtcacatcgagtttttctcctacg 1070

                                                                        
Query: 408  acaagcatagcacacgtatgagactctatttcgcttcataacacgtttgttaccagcatt 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1069 acaagcatagcacacgtatgagactctatttcgcttcataacacgtttgttaccagcatt 1010

                                                                        
Query: 468  gttcttattaacacccacggtactactagagttgttgcttgtattagaacttggtgtcga 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1009 gttcttattaacacccacggtactactagagttgttgcttgtattagaacttggtgtcga 950

                                                                        
Query: 528  cttatctatagtgctaggctgactatgtgaatggctgtgcgaataactctcatcagaagt 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949  cttatctatagtgctaggctgactatgtgaatggctgtgcgaataactctcatcagaagt 890

                                                                        
Query: 588  aggtgatccacgattattagcctgagaaacggtattccattcctttggtgccatgatcag 647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889  aggtgatccacgattattagcctgagaaacggtattccattcctttggtgccatgatcag 830

                                                                        
Query: 648  atatacaagtcacaatggtacctgtctattcgattgtatacgtgttttttttgtattctg 707
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829  atatacaagtcacaatggtacctgtctattcgattgtatacgtgttttttttgtattctg 770

                                                                        
Query: 708  ttagtcgatcgaaaaccaatccatgagtgtgatgagattacttaataagtaaagtaattc 767
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769  ttagtcgatcgaaaaccaatccatgagtgtgatgagattacttaataagtaaagtaattc 710

                                                                        
Query: 768  catatcgatgattctttgtttttatatatatacatacagaaatatcgtagaataagcaag 827
            |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |
Sbjct: 709  catatcgatgattctttgtttttatatatatacatacagaataatcgtagaataagcagg 650

                                                                        
Query: 828  gaaaaagctgagaaacctaaaagaaataggtaccaccatctattgcgactattttttttt 887
            |||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||
Sbjct: 649  gaaaaagctgagaaacctaaaagaataaggtacaaccatctattgcgactattttttttt 590

                       
Query: 888  aaaataaaaaa 898
            | ||| |||||
Sbjct: 589  agaattaaaaa 579


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7508
Number of Sequences: 1807
Number of extensions: 7508
Number of successful extensions: 77
Number of sequences better than 1.0e-20: 1
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)