BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZG07RM1.SCF screened BAC_end (907 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1724 1465 0.0 >3x_Contig1724 Length = 20938 Score = 1465 bits (739), Expect = 0.0 Identities = 778/787 (98%), Gaps = 3/787 (0%) Strand = Plus / Minus Query: 46 atctgtttgccctcttcactgagacatatccaggtccaggacactcggacacaagagaca 105 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 10763 atctgtttgccctcttcactgagacatatccaggtccaggacac-cggacacaagagaca 10705 Query: 106 agagacaagagacaagagaaactaagggagggggaagaaaaacggtattattttaccccg 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10704 agagacaagagacaagagaaactaagggagggggaagaaaaacggtattattttaccccg 10645 Query: 166 catctatttctcttgaagcactctttaaatgctcgtgataattaatcactttgttacatt 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10644 catctatttctcttgaagcactctttaaatgctcgtgataattaatcactttgtaacatt 10585 Query: 226 atgtattctctcttcctaaagtattttcaattacttacccttaatttttgagaggcctct 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10584 atgtattctctcttcctaaagtattttcaattacttacccttaatttttgagaggcctct 10525 Query: 286 ttttcttttcatccgtcagatcaacgatcatagaatcagtttaatcaataaaacttgcgt 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10524 ttttcttttcatccgtcagatcaacgatcatagaatcagtttaatcaataaaacttgcgt 10465 Query: 346 caaactactcgtagaagcaaaggattgaatcgtttacagatttccagtccaaccgaattg 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10464 caaactactcgtagaagcaaaggattgaatcgtttacagatttccagtccaaccgaattg 10405 Query: 406 tcccaatgtcttagatgagactcaggtgctatgtaatggtgtatgtatgtgtggttagca 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10404 tcccaatgtcttagatgagactcaggtgctatgtaatggtgtatgtatgtgtggttagca 10345 Query: 466 tgaattctaacctccattcttgattgttaattggagtatcactcagccaatcaattttca 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10344 tgaattctaacctccattcttgattgttaattggagtatcactcagccaatcaattttca 10285 Query: 526 gaaactgccaaaaccttgaaattttcagcttcaaagaattagatattattataacaaaag 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10284 gaaactgccaaaaccttgaaattttcagcttcaaagaattagatattattataacaaaag 10225 Query: 586 atagagcagcaattacacattcaaacaaaccaatgagaacaaagacagaatcgtgaattg 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10224 atagagcagcaattacacattcaaacaaaccaatgagaacaaagacagaatcgtgaattg 10165 Query: 646 ctgtcgattaggagcgtttgaaaaggtacccaattgttgatcgtttaatcggattagaca 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10164 ctgtcgattaggagcgtttgaaaaggtacccaattgttgatcgtttaatcggattagaca 10105 Query: 706 tcaattgaagcaaataactgtttttgtctctcttagtgagaaaaagtaccgaaaaaag-a 764 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 10104 tcaattgaagcaaataactgtttttgtctctcttagtgagaaaaagtagcgaaaaaagaa 10045 Query: 765 taaatatgtggaggcgttctatctcgattttaaggcccgcaccaac-acagggattccat 823 |||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||| Sbjct: 10044 aaaatatgtggaggcgttctatctcgattttaaggccgtcaccaacaacagtgattccat 9985 Query: 824 ccaatgt 830 ||||||| Sbjct: 9984 ccaatgt 9978 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7441 Number of Sequences: 1807 Number of extensions: 7441 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 907 length of database: 10,358,551 effective HSP length: 16 effective length of query: 891 effective length of database: 10,329,639 effective search space: 9203708349 effective search space used: 9203708349 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)