BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZG11FM1.SCF screened BAC_end (914 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig833 1509 0.0 >3x_Contig833 Length = 3148 Score = 1509 bits (761), Expect = 0.0 Identities = 817/832 (98%), Gaps = 3/832 (0%) Strand = Plus / Plus Query: 84 tggaattctgaaccgattaactgaggattgaataaaatctctggcgctctgaatttctca 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 897 tggaattctgaaccgattaactgaggattgaataaaatctctggcgctctgaatttctca 956 Query: 144 ttatcaagttcaatctgtttcccatctggcagtctgaacattgtttgttttccgtgcatt 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 957 ttatcaagttcaatctgtttcccatctggcagtctgaacattgtttgttttccgtgcatt 1016 Query: 204 gtgtagtttttttttttttctttcggatccaatgctatatagcacgctttctctttgatg 263 ||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1017 gtgtagtttttctcttcttctttcggatccaatgctatatagcacgctttctctttgatg 1076 Query: 264 attcgaacgatctctctttcgctactcgaaagcaaggaaaccccagtggactttcgtata 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1077 attcgaacgatctctctttcgctactcgaaagcaaggaaaccccagtggactttcgtata 1136 Query: 324 ag-aacttgcaaaag-ttctgatatatcacgaccagctatatcaatccttcgtatagctg 381 || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1137 agcaacttgcaaaagcttctgatatatcacgaccagctatatcaatccttcgtatagctg 1196 Query: 382 atggtaatgtgtaaccatcgtaaactggaactgcgtgtgaacaaccatcaccggaatcca 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1197 atggtaatgtgtaaccatcgtaaactggaactgcgtgtgaacaaccatcaccggaatcca 1256 Query: 442 atacgcatcctgttgttcgcccactggcgtatagcgaaagcactgcctgaatcgatacat 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1257 atacgcatcctgttgttcgcccactggcgtatagcgaaagcactgcctgaatcgatacat 1316 Query: 502 ataccgcaggtacactaaaagtttcgaataataactcgcacatctgttctctattctttt 561 ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1317 ataccgcagaacaattaaaagtttcgaataataactcgcacatctgttctctattctttt 1376 Query: 562 tgggattcaatggtgcctcagtgaccaacaccggatgatcttgcaaactgctcagctgta 621 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1377 tgggattcaatggtgcctcagtgaccaacaccggatgatcttgcaaactgctcagctgta 1436 Query: 622 atcctttttcgaaaacatgcccccatagctgctccaatgcattccaatctgtcacaacgc 681 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1437 atcctttttcgaaaacatgcccccatagctgctccaatgcattccaatctgtcacaacgc 1496 Query: 682 catgttctaaaggatggcgtagcttcaaaagaccccgtatttcctgtgcttggtttccaa 741 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1497 catgttctaaaggatggcgta-cttcaaaagaccccgtatttcctgtgcttggtttccaa 1555 Query: 742 cgaaagtattcccatcgaatcttccagccataactttactatatttaggtatccccacca 801 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1556 cgaaagtattcccatcgaatcttccagccataactttactatatttaggtatccccacca 1615 Query: 802 aagaatgttcataacatttangtttatcttcaccttcaaaccccgcctttattagtccag 861 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||| Sbjct: 1616 aagaatgttcataacatttaggtttatcttcacctccaaaccccgcctttattagcccag 1675 Query: 862 acccattgtctagaactataagttgattgaacaatatctcatctttggaatc 913 |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1676 acccattgtctagaactataggttgattgaacaatatctcatctttggaatc 1727 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,120 Number of Sequences: 1807 Number of extensions: 13120 Number of successful extensions: 177 Number of sequences better than 1.0e-20: 1 length of query: 914 length of database: 10,358,551 effective HSP length: 16 effective length of query: 898 effective length of database: 10,329,639 effective search space: 9276015822 effective search space used: 9276015822 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)