BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC14ZG11RM1.SCF screened BAC_end
(921 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1711 1663 0.0
>3x_Contig1711
Length = 15491
Score = 1663 bits (839), Expect = 0.0
Identities = 861/869 (99%)
Strand = Plus / Plus
Query: 50 gctttagactataacatcttctgtttcttgttgtgattgatatgaaacataactgcgcat 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13703 gctttagactataacatcttctgtttcttgttgtgattgatatgaaacataactgcgcat 13762
Query: 110 tcttgttatattgtaatatggtagagtttgcaattgatttatctgtataccagatatata 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13763 tcttgttatattgtaatatggtagagtttgcaattgatttatctgtataccagatatata 13822
Query: 170 atcttgcgcataattcacacaaattaatgttacaactttagtgtcatcttctnattatat 229
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 13823 atcttgcgcataattcacacaaattaatgttacaactttagtgtcatcttcatagtatat 13882
Query: 230 acacaagcgtcttttacagtgtttattacaggaatgttggtttagtgttacaaataaaag 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13883 acacaagcgtcttttacagtgtttattacaggaatgttggtttagtgttacaaataaaag 13942
Query: 290 cggaatataaataacatcgaaattgaagcttccaatgaaacttgtgtatgcttttcaaat 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13943 cggaatataaataacatcgaaattgaagcttccaatgaaacttgtgtatgcttttcaaat 14002
Query: 350 cgttagatatataacgaccgaagtactttttttatcgtattccggggtggttgtttgcat 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14003 cgttagatatataacgaccgaagtactttttttatcgtattccggggtggttgtttgcat 14062
Query: 410 ctgaagcgtcctatacactagtctcaaaaaaatggaataactcctaatcttcctgtcatt 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14063 ctgaagcgtcctatacactagtctcaaaaaaatggaataactcctaatcttcctgtcatt 14122
Query: 470 tatctacagatcctttatctgacccatatgttgttgaccctgcatcgctgaagttgaatg 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14123 tatctacagatcctttatctgacccatatgttgttgaccctgcatcgctgaagttgaatg 14182
Query: 530 ctttgtttgtgggtgtttgactgacattgatgtagggcgataatccaggacttccattgc 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14183 ctttgtttgtgggtgtttgactgacattgatgtagggcgataatccaggacttccattgc 14242
Query: 590 ttacaacatgctgctgttggtgttgctgaccagatgtctgatcattacttggttgttgtt 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14243 ttacaacatgctgctgttggtgttgctgaccagatgtctgatcattacttggttgttgtt 14302
Query: 650 gttgatgttgttgttgttgttgttgttgttgttgatgttgntgcagagattgttgttgag 709
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 14303 gttgatgttgttgttgttgttgttgttgttgttgatgttgttgcagagattgttgttgag 14362
Query: 710 aagtgcttgtcattgcctgacgttgccctgtcgggagtaatgagttgtgctgttgtgacg 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14363 aagtgcttgtcattgcctgacgttgccctgtcgggagtaatgagttgtgctgttgtgacg 14422
Query: 770 ctccagtttgttgatgagacatctgcagatgaggtaaagaactgttcgatcgacccgcgg 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14423 ctccagtttgttgatgagacatctgcagatgaggtaaagaactgttcgatcgacccgcgg 14482
Query: 830 tacttgtattttggaggaatggccattcttgggacatgccaccaattgatgtatttggag 889
||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 14483 tacttgtatttggagggaatggccattcttggaacatgccaccaattgatgtatttggag 14542
Query: 890 actgtacaatcaagtcctgtgcaaattta 918
|||||||||||||||||||||||||||||
Sbjct: 14543 actgtacaatcaagtcctgtgcaaattta 14571
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9331
Number of Sequences: 1807
Number of extensions: 9331
Number of successful extensions: 1007
Number of sequences better than 1.0e-20: 1
length of query: 921
length of database: 10,358,551
effective HSP length: 16
effective length of query: 905
effective length of database: 10,329,639
effective search space: 9348323295
effective search space used: 9348323295
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)