BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZH01RM1.SCF screened BAC_end (891 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1549 1586 0.0 >3x_Contig1549 Length = 13677 Score = 1586 bits (800), Expect = 0.0 Identities = 830/839 (98%), Gaps = 1/839 (0%) Strand = Plus / Plus Query: 44 atatttgttttgccatttttatgctgtacgtacctattgatgtttttggacaaggcattg 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 atatttgttttgccatttttatgctgtacgtacctattgatgtttttggacaaggcattg 637 Query: 104 ttaaattatgccgcatcgatggggatcaaggacaatttggttggtgatgagttttctaat 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 ttaaattatgccgcatcgatggggatcaaggacaatttggttggtgatgagttttctaat 697 Query: 164 ttgggtactattttctctgcatcgtatatctttgcagaaccgtttgcggtgtatttgctc 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 698 ttgggtactattttctctgcatcgtatatctttgcagaaccgtttgcggtgtatttgctc 757 Query: 224 caaaggtttcccgtgtctcgagtgttgggctcgttcatcatatgttggggtgtcgttgtc 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 caaaggtttcccgtgtctcgagtgttgggctcgttcatcatatgttggggtgtcgttgtc 817 Query: 284 gtttgtcattgtgtttgtaagacatatgcaagtttgatgattgtacgtgttctattaggg 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 818 gtttgtcattgtgtttgtaagacatatgcaagtttgatgattgtacgtgttctattaggg 877 Query: 344 ttgttcgagtcgtgtagtgctgtaggatgcattacagtcaacggtatgtattatacgaaa 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 878 ttgttcgagtcgtgtagtgctgtaggatgcattacagtcaacggtatgtattatacgaaa 937 Query: 404 tcggaacaaacgcaaagaattggttactggngctgctcaagcaggaaccggttatatcat 463 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 938 tcggaacaaacgcaaagaattggttactgg-gctgctcaagcaggaaccggttatatcat 996 Query: 464 tggtggtttaatgtcatttgggtttttacattaccacggaactgaatttacctcgtggca 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 997 tggtggtttaatgtcatttgggtttttacattaccacggaactgaatttacctcgtggca 1056 Query: 524 aatcatgttccttgttgtcggtttagtgaccgtgggaatcggtatagtaacctatttcta 583 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1057 aatcatgttccttgttgtcggtttagtgaccgtgggattcggtatagtaacctatttcta 1116 Query: 584 tttaccagataacgttcctaaggcatggttccttaacgagaaggagaaagtccaagtcat 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1117 tttaccagataacgttcctaaggcatggttccttaacgagaaggagaaagtccaagtcat 1176 Query: 644 tgaacatatcagatcaaaccaaactggtcttgaaacaaagaaaatcaagatgcaccaagt 703 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1177 tgaacatatcagatcaaaccaaactggtcttgaaacaaagaaaatcaagatgcaccaagt 1236 Query: 704 gaaagaattgttactcaaggataaattgacatggccaatgttattattgactggttgttc 763 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1237 gaaagaattgttactcaaggataaattgacatggccaatgttattattgactggttgttc 1296 Query: 764 tcaaatttcaactggatccattggaacctttttagtgaccatcacaggtacattttgttt 823 |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| Sbjct: 1297 tcaaatttcaactggatccattggaaccttttcagtgaccatcacaggtacatttggttt 1356 Query: 824 tgatagctaccagacattccttttggcacttccnatcggatgctttaccatcatgatta 882 ||||||||||||||||| ||||||| |||||| ||||||||| ||||||||||||||| Sbjct: 1357 tgatagctaccagacatcccttttgcaacttcctatcggatgcgttaccatcatgatta 1415 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6553 Number of Sequences: 1807 Number of extensions: 6553 Number of successful extensions: 32 Number of sequences better than 1.0e-20: 1 length of query: 891 length of database: 10,358,551 effective HSP length: 16 effective length of query: 875 effective length of database: 10,329,639 effective search space: 9038434125 effective search space used: 9038434125 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)