BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZH02FM1.SCF screened BAC_end (919 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1071 535 e-152 >3x_Contig1071 Length = 4881 Score = 535 bits (270), Expect = e-152 Identities = 347/364 (95%), Gaps = 8/364 (2%) Strand = Plus / Minus Query: 557 tttgatcaatttccccttcgagctcttattcggcttctacgtggccaggttatcaagagc 616 ||||||||||| ||||||||||||||||| ||||||||||||| |||| ||||||||||| Sbjct: 4877 tttgatcaatt-ccccttcgagctcttat-cggcttctacgtgcccag-ttatcaagagc 4821 Query: 617 tggttactcctttaataataaaattatcagggccgttgctggagatgcaagaacgttgac 676 || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4820 tg-ttactcctttaataagaaaattatcagggccgttgctggagatgcaagaacgttgac 4762 Query: 677 cccatggatcatcgggttcattggccgtttatctgccgctattctcggaaacgttgttgt 736 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4761 cccatggatcatcgggttcattggccgtttatctgccgctattctcggaaacgttgttgt 4702 Query: 737 ttatctttt--ccagaagatgaatccgagatcagcatgtcatttttcctactagtcttgt 794 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4701 ttatcttttccccagaagatgaatccgagatcagcatgtcatttttcctactagtcttgt 4642 Query: 795 gccaacatctattgngatccttcatgagcacctttccattcgtcagcatgtctgcttttc 854 |||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||| | Sbjct: 4641 gccaacatctattgggatccttcatgagcaccttccaattcgtcagcatgtctgctttcc 4582 Query: 855 atacccaagtagcagatccagtcattcgtagg-acgtatatgactcttcttaacacgttg 913 |||||||||||||||||||||||| ||| ||| |||||||||||||| || ||||||||| Sbjct: 4581 atacccaagtagcagatccagtca-tcggaggaacgtatatgactctcctaaacacgttg 4523 Query: 914 agca 917 |||| Sbjct: 4522 agca 4519 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6661 Number of Sequences: 1807 Number of extensions: 6661 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 919 length of database: 10,358,551 effective HSP length: 16 effective length of query: 903 effective length of database: 10,329,639 effective search space: 9327664017 effective search space used: 9327664017 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)