BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZH07RM1.SCF screened BAC_end (904 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig634 1479 0.0 >3x_Contig634 Length = 1748 Score = 1479 bits (746), Expect = 0.0 Identities = 838/859 (97%), Gaps = 8/859 (0%) Strand = Plus / Plus Query: 49 tgaagcacacctagtgtggaca-tggatctctgcttctctatcgcctactgtttttccgt 107 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 555 tgaagcacacctagtgtggacaatggatctctgcttctctatcgcctactgtttttccgt 614 Query: 108 ttcgtaaccccatgcctttgtttacattttaactaatcttaattattgatgatttcattt 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 615 ttcgtaaccccatgcctttgtttacattttaactaatcttaattattgatgatttcattt 674 Query: 168 gaagtaacgggaaaagttgcttggtagataaggcacgtagaggtcaggaagcttgcaaca 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 675 gaagtaacgggaaaagttgcttggtagataaggcacgtagaggtcaggaagcttgcaaca 734 Query: 228 tcaaaagattaatgcttagatgacttccatggagagctgaaattatatgaatattaatat 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 tcaaaagattaatgcttagatgacttccatggagagctgaaattatatgaatattaatat 794 Query: 288 atttgtttgattggtaccttgtatgttgtttatgtgtatatttatatgttaataatacat 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 atttgtttgattggtaccttgtatgttgtttatgtgtatatttatatgttaataatacat 854 Query: 348 agtaccaactctggtgcacttgtaagatacctatgcagtgtaagaaaggaaggtgggaaa 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 855 agtaccaactctggtgcacttgtaagatacctatgcagtgtaagaaaggaaggtgggaaa 914 Query: 408 tttcttcaattactcatggcctgagcgttgaagttttttgatcgtgactgatatcttcta 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 915 tttcttcaattactcatggcctgagcgttgaagttttttgatcgtgactgatatcttcta 974 Query: 468 aaacttgatgtataacttcttcttgcagtctcttctcgttctgatcttgtgagttttctt 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 aaacttgatgtataacttcttcttgcagtctcttctcgttctgatcttgtgagttttctt 1034 Query: 528 cgtggtcagaattttgatcttcaccagaatcatctttgccattttcttctgtttgtggct 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1035 cgtggtcagaattttgatcttcaccagaatcatctttgccattttcttctgtttgtggct 1094 Query: 588 cagattcttgagttatggcaggtggagcgtattgttggtgctgggaatgctgctgttctg 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1095 cagattcttgagttatggcaggtggagcgtattgttggtgctgggaatgctgctgttctg 1154 Query: 648 aaggttctgtcaataatttgtgtaaagcactatcatggttggcgtaaagatctttgaact 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1155 aaggttctgtcaataatttgtgtaaagcactatcatggttggcgtaaagatctttgaact 1214 Query: 708 tacccatttccacaactgaaccatcgatgccaagtacaataacattctcggattctctga 767 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| | Sbjct: 1215 tacccatttccacaactgaaccatcgatgccaagtacaataacattctcgtatcttctta 1274 Query: 768 ttgtgctcaatctatgagnncatgctgat-atagttaattc-tttgctcttcattaacc- 824 || | ||||||||||||| |||||||| ||| ||||||| ||||||||||||||||| Sbjct: 1275 tttttctcaatctatgagca-atgctgataatatttaattcttttgctcttcattaacct 1333 Query: 825 ctcccaagngtagtttgatagcgccctcactttcaacgtcttagggcagatgtagccttc 884 | || || |||| |||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 1334 ccccaaattgtag-ttgatagcgccctcactttcaacgtc-tagggcagatgtag-cttc 1390 Query: 885 gtcgagaatcaaaatttta 903 ||||||||||||||||||| Sbjct: 1391 gtcgagaatcaaaatttta 1409 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7164 Number of Sequences: 1807 Number of extensions: 7164 Number of successful extensions: 64 Number of sequences better than 1.0e-20: 1 length of query: 904 length of database: 10,358,551 effective HSP length: 16 effective length of query: 888 effective length of database: 10,329,639 effective search space: 9172719432 effective search space used: 9172719432 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)