BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZH09FM1.SCF screened BAC_end (952 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1140 1580 0.0 >3x_Contig1140 Length = 5352 Score = 1580 bits (797), Expect = 0.0 Identities = 844/859 (98%), Gaps = 1/859 (0%) Strand = Plus / Plus Query: 87 catatgcagcgctgtacttttcccggagaggtttcaaagcatcaacatatttctgtttct 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 495 catatgcagcgctgtacttttcccggagaggtttcaaagcatcaacatatttctgtttct 554 Query: 147 cactttctgatagtgacctccactgtttccctgcaatcttcatagcgccagggttggaaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 cactttctgatagtgacctccactgtttccctgcaatcttcatagcgccagggttggaaa 614 Query: 207 cattgtgtgatgctcaaatatgatcgtgcacttggctgaaatagtaagagaatgcagttg 266 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 615 cattgtgtgatgcgcaaatatgatcgtgcacttggctgaaatagtaagagaatgcagttg 674 Query: 267 gtggtctctttggcttgactgctgcttcaagagcaattggggaaactgacaaaaagcgtt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 675 gtggtctctttggcttgactgctgcttcaagagcaattggggaaactgacaaaaagcgtt 734 Query: 327 taaatatcatagttgaatagttagtcgattccttagtagaatactttgttatacttttga 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 taaatatcatagttgaatagttagtcgattccttagtagaatactttgttatacttttga 794 Query: 387 agggaagtaatagaatgagtagataatatatttaagcgtttgacttgtacaagaaacttg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 agggaagtaatagaatgagtagataatatatttaagcgtttgacttgtacaagaaacttg 854 Query: 447 gcatgggtttgtattatagcggatgattgcttgtttttaattgtttgtttttgttttgga 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 855 gcatgggtttgtattatagcggatgattgcttgtttttaattgtttgtttttgttttgga 914 Query: 507 agggtaaaaaaaaggtctcataagagggggggcgggtagcgctcgagaagatttctgatt 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 915 agggtaaaaaaaaggtctcataagagggggggcgggtagcgctcgagaagatttctgatt 974 Query: 567 tataagtcacgtgtatgtccgattaagggtgaaatggacttgggttatcaaaattaggtt 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 tataagtcacgtgtatgtccgattaagggtgaaatggacttgggttatcaaaattaggtt 1034 Query: 627 acaatgccattcaaattattgagatttgaactgaaatgcaatgatcatggagaaagcgtt 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1035 acaatgccattcaaattattgagatttgaactgaaatgcaatgatcatggagaaagcgtt 1094 Query: 687 agacggatagcaaccgggtgatttttgtcgaccaagtacttgctaatatcgtggtataaa 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1095 agacggatagcaaccgggtgatttttgtcgaccaagtacttgctaatatcgtggtataaa 1154 Query: 747 gatctgtgatggcatttgtggaatgntttatagtgatcgtttgattgcgctgcggattat 806 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 1155 gatctgtgatggcaattgtggaatgttttatagtgatcgtttgattgcgctgcggataat 1214 Query: 807 attttgagtagagagcctttagattgattccctttanacgttgtgttataccgtaatgtc 866 |||||||||||||||||||||||||||||||||| | |||| |||| ||||||||||||| Sbjct: 1215 attttgagtagagagcctttagattgattcccttaaaacgtcgtgtaataccgtaatgtc 1274 Query: 867 attggtagtttactcccaagaatgagatctagttcctgtgaaaaggtcagattgtggttt 926 ||||||||||||||||||||| ||||||||||||||| || |||||||||||||| || Sbjct: 1275 attggtagtttactcccaagatagagatctagttcctg-gagaaggtcagattgtgagtt 1333 Query: 927 tacaaccaggcgttttttg 945 ||||||||||||| ||||| Sbjct: 1334 tacaaccaggcgtattttg 1352 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6233 Number of Sequences: 1807 Number of extensions: 6233 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 952 length of database: 10,358,551 effective HSP length: 16 effective length of query: 936 effective length of database: 10,329,639 effective search space: 9668542104 effective search space used: 9668542104 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)