BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZH12FM1.SCF screened BAC_end (947 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig925 1649 0.0 >3x_Contig925 Length = 3823 Score = 1649 bits (832), Expect = 0.0 Identities = 856/860 (99%), Gaps = 3/860 (0%) Strand = Plus / Minus Query: 86 atttcccccccctttgaatatgaaaacaaccttatactagatagaaaaggcaggtttttt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3443 atttcccccccctttgaatatgaaaacaaccttatactagatagaaaaggcaggtttttt 3384 Query: 146 tcagatcctctttagctgcgcttattgattccaaaatattagtaaactatagttactgta 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3383 tcagatcctctttagctgcgcttattgattccaaaatattagtaaactatagttactgta 3324 Query: 206 gagcgtgcagtggtgctggtatgaccttttaacctggtgagatgttcatgaagatgagtt 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3323 gagcgtgcagtggtgctggtatgaccttttaacctggtgagatgttcatgaagatgagtt 3264 Query: 266 agatgtaaatccttatgatcgttgttttaatatcaaaaaactcaaaacgcgaaaacgcga 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3263 agatgtaaatccttatgatcgttgttttaatatcaaaaaactcaaaacgcgaaaacgcga 3204 Query: 326 aactggtgttttggggagagttttcgggcccatttctggggaccggaaactggggatgcg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3203 aactggtgttttggggagagttttcgggcccatttctggggaccggaaactggggatgcg 3144 Query: 386 attaaaagacagtacagacagcactctcaaccgcagagacctcatatatagccataacgc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3143 attaaaagacagtacagacagcactctcaaccgcagagacctcatatatagccataacgc 3084 Query: 446 ccacaaagggtttatagatgatctactggcccttcacaagctctaaatcgctgatacatg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3083 ccacaaagggtttatagatgatctactggcccttcacaagctctaaatcgctgatacatg 3024 Query: 506 aggaattgaccgatatttagccgtatcttgtctttaacccactttgttacccggcctttt 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3023 aggaattgaccgatatttagccgtatcttgtctttaacccactttgttacccggcctttt 2964 Query: 566 gccctttttccgtaatcatttgaccacttaatcattgaactatccaatcaagtcacttaa 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2963 gccctttttccgtaatcatttgaccacttaatcattgaactatccaatcaagtcacttaa 2904 Query: 626 cgatgagtaacatcacttctgttcagtctctgtatacttaacttgtccatttgacgagtc 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2903 cgatgagtaacatcacttctgttcagtctctgtatacttaacttgtccatttgacgagtc 2844 Query: 686 tccgacagctagctagactgttataataccaattgtccccgccatgtcagttctcagacc 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2843 tccgacagctagctagactgttataataccaattgtccccgccatgtcagttctcagacc 2784 Query: 746 attaagattgttactactgggtgcacccggttctggtaaaggtactcagacctcgaaact 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2783 attaagattgttactactgggtgcacccggttctggtaaaggtactcagacctcgaaact 2724 Query: 806 gttgaaagaa-tcggatccatcaaggctatctcatctggagatttgctacgtaaacagat 864 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2723 gttgaaagaattcggatccatcaaggctatctcatctggagatttgctacgtaaacagat 2664 Query: 865 tgaacatgccacaccgttaggtttaagtgcctcctcgtatattgagaaa-gccagttgtt 923 |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2663 tgaacatggcacaccgttaggtttaagtgcctcctcgtatattgagaaaggccagttgtt 2604 Query: 924 accc-atgatttgatcaccg 942 |||| ||||||||||||||| Sbjct: 2603 acccgatgatttgatcaccg 2584 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5254 Number of Sequences: 1807 Number of extensions: 5254 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 947 length of database: 10,358,551 effective HSP length: 16 effective length of query: 931 effective length of database: 10,329,639 effective search space: 9616893909 effective search space used: 9616893909 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)