BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC14ZH12FM1.SCF screened BAC_end
         (947 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig925                                                         1649   0.0  

>3x_Contig925 
          Length = 3823

 Score = 1649 bits (832), Expect = 0.0
 Identities = 856/860 (99%), Gaps = 3/860 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   atttcccccccctttgaatatgaaaacaaccttatactagatagaaaaggcaggtttttt 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3443 atttcccccccctttgaatatgaaaacaaccttatactagatagaaaaggcaggtttttt 3384

                                                                        
Query: 146  tcagatcctctttagctgcgcttattgattccaaaatattagtaaactatagttactgta 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3383 tcagatcctctttagctgcgcttattgattccaaaatattagtaaactatagttactgta 3324

                                                                        
Query: 206  gagcgtgcagtggtgctggtatgaccttttaacctggtgagatgttcatgaagatgagtt 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3323 gagcgtgcagtggtgctggtatgaccttttaacctggtgagatgttcatgaagatgagtt 3264

                                                                        
Query: 266  agatgtaaatccttatgatcgttgttttaatatcaaaaaactcaaaacgcgaaaacgcga 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3263 agatgtaaatccttatgatcgttgttttaatatcaaaaaactcaaaacgcgaaaacgcga 3204

                                                                        
Query: 326  aactggtgttttggggagagttttcgggcccatttctggggaccggaaactggggatgcg 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3203 aactggtgttttggggagagttttcgggcccatttctggggaccggaaactggggatgcg 3144

                                                                        
Query: 386  attaaaagacagtacagacagcactctcaaccgcagagacctcatatatagccataacgc 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3143 attaaaagacagtacagacagcactctcaaccgcagagacctcatatatagccataacgc 3084

                                                                        
Query: 446  ccacaaagggtttatagatgatctactggcccttcacaagctctaaatcgctgatacatg 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3083 ccacaaagggtttatagatgatctactggcccttcacaagctctaaatcgctgatacatg 3024

                                                                        
Query: 506  aggaattgaccgatatttagccgtatcttgtctttaacccactttgttacccggcctttt 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3023 aggaattgaccgatatttagccgtatcttgtctttaacccactttgttacccggcctttt 2964

                                                                        
Query: 566  gccctttttccgtaatcatttgaccacttaatcattgaactatccaatcaagtcacttaa 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2963 gccctttttccgtaatcatttgaccacttaatcattgaactatccaatcaagtcacttaa 2904

                                                                        
Query: 626  cgatgagtaacatcacttctgttcagtctctgtatacttaacttgtccatttgacgagtc 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2903 cgatgagtaacatcacttctgttcagtctctgtatacttaacttgtccatttgacgagtc 2844

                                                                        
Query: 686  tccgacagctagctagactgttataataccaattgtccccgccatgtcagttctcagacc 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2843 tccgacagctagctagactgttataataccaattgtccccgccatgtcagttctcagacc 2784

                                                                        
Query: 746  attaagattgttactactgggtgcacccggttctggtaaaggtactcagacctcgaaact 805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2783 attaagattgttactactgggtgcacccggttctggtaaaggtactcagacctcgaaact 2724

                                                                        
Query: 806  gttgaaagaa-tcggatccatcaaggctatctcatctggagatttgctacgtaaacagat 864
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2723 gttgaaagaattcggatccatcaaggctatctcatctggagatttgctacgtaaacagat 2664

                                                                        
Query: 865  tgaacatgccacaccgttaggtttaagtgcctcctcgtatattgagaaa-gccagttgtt 923
            |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2663 tgaacatggcacaccgttaggtttaagtgcctcctcgtatattgagaaaggccagttgtt 2604

                                
Query: 924  accc-atgatttgatcaccg 942
            |||| |||||||||||||||
Sbjct: 2603 acccgatgatttgatcaccg 2584


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5254
Number of Sequences: 1807
Number of extensions: 5254
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 947
length of database: 10,358,551
effective HSP length: 16
effective length of query: 931
effective length of database: 10,329,639
effective search space: 9616893909
effective search space used: 9616893909
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)