BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC14ZH12RM1.SCF screened BAC_end (953 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1358 1641 0.0 >3x_Contig1358 Length = 7912 Score = 1641 bits (828), Expect = 0.0 Identities = 886/901 (98%), Gaps = 4/901 (0%) Strand = Plus / Minus Query: 47 taaagaaat-aatgcagatttcaatgttataactggagtccatgcattctttaatatatc 105 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7471 taaagaaatcaatgcagatttcaatgttataactggagtccatgcattctttaatatatc 7412 Query: 106 aaggcaaatagcaccagttacagatgatacattgggatggtacacctttgtgtcaaactt 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7411 aaggcaaatagcaccagttacagatgatacattgggatggtacacctttgtgtcaaactt 7352 Query: 166 catttggggtggtttatacggatattccacgggtatatttatatcaacgatttatttacc 225 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 7351 catttggggtggtttatacggatattccacgggtatatttatatcaacgacgaatttacc 7292 Query: 226 tccctcgtatggcgttccactagggccaatgaagctgcccttcatatgatggatatcaga 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7291 tccctcgtatggcgttccactagggccaatgaagctgcccttcatatgatggatatcaga 7232 Query: 286 ctcattgacaaactttaactcaatttgggcctctggatcctctttcaccgcttggatttc 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7231 ctcattgacaaactttaactcaatttgggcctctggatcctctttcaccgcttggatttc 7172 Query: 346 cttcaaaattctcttcgaccttagcatcctgttagattaattggtaattcagtggcactt 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7171 cttcaaaattctcttcgaccttagcatcctgttagattaattggtaattcagtggcactt 7112 Query: 406 tcaaatgcacccgctccagttattgggtgtaataaaccgttctcgaaagatgtgataact 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7111 tcaaatgcacccgctccagttattgggtgtaataaaccgttctcgaaagatgtgataact 7052 Query: 466 atgaataagcacacgtatatatgtatgatcttttctttccatacattaatggatgttcaa 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7051 atgaataagcacacgtatatatgtatgatcttttctttccatacattaatggatgttcaa 6992 Query: 526 tcgtttgcatacagtatcatcaatgttaatggtatttgatataagaagtagaaactggtg 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6991 tcgtttgcatacagtatcatcaatgttaatggtatttgatataagaagtagaaactggtg 6932 Query: 586 atgagggtaacaaagacatgtttccctttcaacataactgagttaaacatcacctataag 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6931 atgagggtaacaaagacatgtttccctttcaacataactgagttaaacatcacctataag 6872 Query: 646 attatagtacattggtatatactggttcgttgtgtatattagatagaaggttcacgtatt 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6871 attatagtacattggtatatactggttcgttgtgtatattagatagaaggttcacgtatt 6812 Query: 706 atgtggttgaagaggaagcangaagttgactttcatcgtcttgttccgcgaagtgcaaga 765 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 6811 atgtggttgaagaggaagcaggaagttgactttcatcgtcttgttccgcgaagtgcaaga 6752 Query: 766 atgtgtgatctcccatctttcttggagtgataatcaatttaatgacanatattacaccga 825 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 6751 atgtgtgatctcccatctttcttggagtgataatcaatttaatgacaaatattacaccga 6692 Query: 826 acaagattgcaataccggncacgattaggtatactattccctagcgacatgttttttgcc 885 |||||||||||||||||| |||||| |||||||||| |||||||||||||| ||| |||| Sbjct: 6691 acaagattgcaataccggccacgataaggtatacta-tccctagcgacatg-tttctgcc 6634 Query: 886 accgataatactatttgttgtcaagattaaggatttacttccttccaaagatctgtactg 945 ||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||| Sbjct: 6633 accgataatactatttgttgtcaagatgtaagatttacttcc-tccaaagatctgtactg 6575 Query: 946 g 946 | Sbjct: 6574 g 6574 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6886 Number of Sequences: 1807 Number of extensions: 6886 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 953 length of database: 10,358,551 effective HSP length: 16 effective length of query: 937 effective length of database: 10,329,639 effective search space: 9678871743 effective search space used: 9678871743 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)