BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC15ZA03RM1.SCF screened BAC_end
         (939 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig226                                                         1485   0.0  

>3x_Contig226 
          Length = 1863

 Score = 1485 bits (749), Expect = 0.0
 Identities = 833/852 (97%), Gaps = 7/852 (0%)
 Strand = Plus / Plus

                                                                        
Query: 48   tgaccggtggtagaggtatttgtcatttcgataacggtatgcaatctggtatccatatga 107
            ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||
Sbjct: 332  tgaccggtggtagaggtaaaggtcatttcgataacggtatgcaatctggtatccatatga 391

                                                                        
Query: 108  tcgattctgtgcaagatgctactgaagtcagtggtaagatgcttggttaccatttgatca 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392  tcgattctgtgcaagatgctactgaagtcagtggtaagatgcttggttaccatttgatca 451

                                                                        
Query: 168  ccaagcaatctggtattaagggtaagttagtgtccggtgtttacattgtcgaaagagtga 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452  ccaagcaatctggtattaagggtaagttagtgtccggtgtttacattgtcgaaagagtga 511

                                                                        
Query: 228  atgccaaacacgaagcttatttgtctatcttgatggacagaaagactaagaagccattga 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512  atgccaaacacgaagcttatttgtctatcttgatggacagaaagactaagaagccattga 571

                                                                        
Query: 288  tcatttgctctagtgaaggtggtatgaatatcgaagatgtggcaaagaccaacccagatg 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572  tcatttgctctagtgaaggtggtatgaatatcgaagatgtggcaaagaccaacccagatg 631

                                                                        
Query: 348  ctatcaagaagttctacgtcgaagattccgttggattgaccccagaaactgctgctgaga 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632  ctatcaagaagttctacgtcgaagattccgttggattgaccccagaaactgctgctgaga 691

                                                                        
Query: 408  ttgctgcctccttgggtttctccaaggaagccgaagctgatgctaaggatgcagtcttga 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692  ttgctgcctccttgggtttctccaaggaagccgaagctgatgctaaggatgcagtcttga 751

                                                                        
Query: 468  agttatataagatcttcaaggaaaaggatgctactcaaatcgaaattaacccattgagtg 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752  agttatataagatcttcaaggaaaaggatgctactcaaatcgaaattaacccattgagtg 811

                                                                        
Query: 528  aagttcttgaccaggataagaaggtcatgtgtatggatgccaagttcggtttcgatgaca 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812  aagttcttgaccaggataagaaggtcatgtgtatggatgccaagttcggtttcgatgaca 871

                                                                        
Query: 588  atgccttcttcagacaaaaagacgtgtactcatggagagatttgactcaagaagatccag 647
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872  atgcctccttcagacaaaaagacgtgtactcatggagagatttgactcaagaagatccag 931

                                                                        
Query: 648  atgaagttaccgccaagaagagtgacttgaactttgtcaagttaaagggtaatattcgtt 707
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 932  atgaagttaccgccaagaagagtgacttgaactttgtcaagttaaagggtaatatcggtt 991

                                                                        
Query: 708  gtttggt-aacggtgccggtttagccatggccaccatggatgtcattaag-tatatggtg 765
            ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 992  gtttggtcaacggtgccggtttagccatggccaccatggatgtcattaagttatatggtg 1051

                                                                        
Query: 766  gtgatccagctaacttctttgtattgtggtggtgggtgccactccggnaactttcgaaac 825
            ||||||||||||||||| ||| ||||||||||| ||||||||||||| |||| |||||||
Sbjct: 1052 gtgatccagctaacttc-ttggattgtggtggt-ggtgccactccggaaactatcgaaac 1109

                                                                        
Query: 826  tgctttcaagttgaatcttgtccaacgataacgtccatgccatttttcgttaacattttt 885
            ||||||||||||| ||||||||||||||||||||| |||||| | |||||||||| ||||
Sbjct: 1110 tgctttcaagttg-atcttgtccaacgataacgtcgatgcca-tcttcgttaaca-tttt 1166

                        
Query: 886  tggtggtattgt 897
             |||||||||||
Sbjct: 1167 cggtggtattgt 1178


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6599
Number of Sequences: 1807
Number of extensions: 6599
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 939
length of database: 10,358,551
effective HSP length: 16
effective length of query: 923
effective length of database: 10,329,639
effective search space: 9534256797
effective search space used: 9534256797
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)