BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC15ZA03RM1.SCF screened BAC_end (939 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig226 1485 0.0 >3x_Contig226 Length = 1863 Score = 1485 bits (749), Expect = 0.0 Identities = 833/852 (97%), Gaps = 7/852 (0%) Strand = Plus / Plus Query: 48 tgaccggtggtagaggtatttgtcatttcgataacggtatgcaatctggtatccatatga 107 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 332 tgaccggtggtagaggtaaaggtcatttcgataacggtatgcaatctggtatccatatga 391 Query: 108 tcgattctgtgcaagatgctactgaagtcagtggtaagatgcttggttaccatttgatca 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 tcgattctgtgcaagatgctactgaagtcagtggtaagatgcttggttaccatttgatca 451 Query: 168 ccaagcaatctggtattaagggtaagttagtgtccggtgtttacattgtcgaaagagtga 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 452 ccaagcaatctggtattaagggtaagttagtgtccggtgtttacattgtcgaaagagtga 511 Query: 228 atgccaaacacgaagcttatttgtctatcttgatggacagaaagactaagaagccattga 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512 atgccaaacacgaagcttatttgtctatcttgatggacagaaagactaagaagccattga 571 Query: 288 tcatttgctctagtgaaggtggtatgaatatcgaagatgtggcaaagaccaacccagatg 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 572 tcatttgctctagtgaaggtggtatgaatatcgaagatgtggcaaagaccaacccagatg 631 Query: 348 ctatcaagaagttctacgtcgaagattccgttggattgaccccagaaactgctgctgaga 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 632 ctatcaagaagttctacgtcgaagattccgttggattgaccccagaaactgctgctgaga 691 Query: 408 ttgctgcctccttgggtttctccaaggaagccgaagctgatgctaaggatgcagtcttga 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 692 ttgctgcctccttgggtttctccaaggaagccgaagctgatgctaaggatgcagtcttga 751 Query: 468 agttatataagatcttcaaggaaaaggatgctactcaaatcgaaattaacccattgagtg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 752 agttatataagatcttcaaggaaaaggatgctactcaaatcgaaattaacccattgagtg 811 Query: 528 aagttcttgaccaggataagaaggtcatgtgtatggatgccaagttcggtttcgatgaca 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 812 aagttcttgaccaggataagaaggtcatgtgtatggatgccaagttcggtttcgatgaca 871 Query: 588 atgccttcttcagacaaaaagacgtgtactcatggagagatttgactcaagaagatccag 647 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 872 atgcctccttcagacaaaaagacgtgtactcatggagagatttgactcaagaagatccag 931 Query: 648 atgaagttaccgccaagaagagtgacttgaactttgtcaagttaaagggtaatattcgtt 707 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 932 atgaagttaccgccaagaagagtgacttgaactttgtcaagttaaagggtaatatcggtt 991 Query: 708 gtttggt-aacggtgccggtttagccatggccaccatggatgtcattaag-tatatggtg 765 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 992 gtttggtcaacggtgccggtttagccatggccaccatggatgtcattaagttatatggtg 1051 Query: 766 gtgatccagctaacttctttgtattgtggtggtgggtgccactccggnaactttcgaaac 825 ||||||||||||||||| ||| ||||||||||| ||||||||||||| |||| ||||||| Sbjct: 1052 gtgatccagctaacttc-ttggattgtggtggt-ggtgccactccggaaactatcgaaac 1109 Query: 826 tgctttcaagttgaatcttgtccaacgataacgtccatgccatttttcgttaacattttt 885 ||||||||||||| ||||||||||||||||||||| |||||| | |||||||||| |||| Sbjct: 1110 tgctttcaagttg-atcttgtccaacgataacgtcgatgcca-tcttcgttaaca-tttt 1166 Query: 886 tggtggtattgt 897 ||||||||||| Sbjct: 1167 cggtggtattgt 1178 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6599 Number of Sequences: 1807 Number of extensions: 6599 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 939 length of database: 10,358,551 effective HSP length: 16 effective length of query: 923 effective length of database: 10,329,639 effective search space: 9534256797 effective search space used: 9534256797 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)