BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC15ZB01RM1.SCF screened BAC_end (894 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1484 1594 0.0 >3x_Contig1484 Length = 9345 Score = 1594 bits (804), Expect = 0.0 Identities = 838/848 (98%), Gaps = 2/848 (0%) Strand = Plus / Plus Query: 48 agctgccatacaaaaaaattttatttttttgttctttccattttactaactaacaattgc 107 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2979 agctgccatacaaaaaaatttcatttttttgttctttccattttactaactaacaattgc 3038 Query: 108 atcaatatagtacctctgctactcaagctgacgtctctgctttcaaggctttccaatcta 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3039 atcaatatagtacctctgctactcaagctgacgtctctgctttcaaggctttccaatcta 3098 Query: 168 cttacccagaattctctagatggttcaaccacattgcttccaaggctgatcaattcgaat 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3099 cttacccagaattctctagatggttcaaccacattgcttccaaggctgatcaattcgaat 3158 Query: 228 ccttgccagctgctacttctacaccagctgctgctgaagaagaagatgacgatgacgaag 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3159 ccttgccagctgctacttctacaccagctgctgctgaagaagaagatgacgatgacgaag 3218 Query: 288 tcgatttgttcggttctgacgatgatgtcgatgaagaagctgaacaattgaaggctaaga 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3219 tcgatttgttcggttctgacgatgatgtcgatgaagaagctgaacaattgaaggctaaga 3278 Query: 348 gaatcgctgaatacaacgaaaagaaggctgctaagccaaaggctgctgctaagtctatcg 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3279 gaatcgctgaatacaacgaaaagaaggctgctaagccaaaggctgctgctaagtctatcg 3338 Query: 408 ttaccttggatgttaagccatgggatgacgaaaccgatttggaagaattggttgccaacg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3339 ttaccttggatgttaagccatgggatgacgaaaccgatttggaagaattggttgccaacg 3398 Query: 468 ttaagaacatcgaaatggatggtttgaactggggtgctcaccaatggattccaattggtt 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3399 ttaagaacatcgaaatggatggtttgaactggggtgctcaccaatggattccaattggtt 3458 Query: 528 tcggtatcaagaagttgcaaattaacatggtcatcgaagatgctaaggtttctcttgatg 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3459 tcggtatcaagaagttgcaaattaacatggtcatcgaagatgctaaggtttctcttgatg 3518 Query: 588 aattgcaacaacttatcgaagaagatgaagaccacgtccaatctactgatgttgctgcta 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3519 aattgcaacaacttatcgaagaagatgaagaccacgtccaatctactgatgttgctgcta 3578 Query: 648 tgcaaaagttgtaattaaactaatttaagttcttcacctttttccccttacataaatgaa 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3579 tgcaaaagttgtaattaaactaatttaagttcttcacctttttccccttacataaatgaa 3638 Query: 708 taaataaatatactatatttctcaacgacccccttcgtgctttcttgctggacccgaacc 767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3639 taaataaatatactatatttctcaacgacccccttcgtgctttcttgctggacccgaacc 3698 Query: 768 cttgctgnctcttntatcctgntatgttcatctttctttta-gtttacagcctctgagca 826 ||||||| ||||| ||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 3699 cttgctgtctcttttatcctgttatgttcatctttcttttaggtttacagcctctgagca 3758 Query: 827 tctttagaatagaaatgtgcataatttanatgcctatagat-attaattaaacatcatgc 885 |||| |||||||||||||||||||| || |||| ||||||| |||||||||||||||||| Sbjct: 3759 tcttaagaatagaaatgtgcataatataaatgcatatagataattaattaaacatcatgc 3818 Query: 886 tgcattta 893 |||||||| Sbjct: 3819 tgcattta 3826 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9750 Number of Sequences: 1807 Number of extensions: 9750 Number of successful extensions: 160 Number of sequences better than 1.0e-20: 1 length of query: 894 length of database: 10,358,551 effective HSP length: 16 effective length of query: 878 effective length of database: 10,329,639 effective search space: 9069423042 effective search space used: 9069423042 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)