BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC15ZB08RM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1653 1612 0.0 >3x_Contig1653 Length = 14012 Score = 1612 bits (813), Expect = 0.0 Identities = 867/880 (98%), Gaps = 4/880 (0%) Strand = Plus / Plus Query: 52 gctttgatgtcattttgccaaaattgctgttgtacattatatatttttaccttaatgtcc 111 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 6474 gctttgatgtcattttgccaaaatgtctgttgtacattatatatttttaccttaatgtcc 6533 Query: 112 agccatcagttcccttcgtatttcaatcacacaactctgacaggaattaaatcatctctt 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6534 agccatcagttcccttcgtatttcaatcacacaactctgacaggaattaaatcatctctt 6593 Query: 172 ttcagtcccaacgctaacagtattttcataagactcagcttggcttgcaaaattatacac 231 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 6594 ttcagtcccaacgctaacagtattttcataagactcagcttggcttgcaaaatta-acac 6652 Query: 232 gcgtactataggatatttggaaatgtcgctatatcatagcctagtatttgctatcttagt 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6653 gcgtactataggatatttggaaatgtcgctatatcatagcctagtatttgctatcttagt 6712 Query: 292 cgtggaattgattacattgactttgttaggtcttccacttccctcgaagtttaagaaacc 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6713 cgtggaattgattacattgactttgttaggtcttccacttccctcgaagtttaagaaacc 6772 Query: 352 tgtcatctctgccctttcgaaacctttcttttctcctacggttcagataacaatcaaatg 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6773 tgtcatctctgccctttcgaaacctttcttttctcctacggttcagataacaatcaaatg 6832 Query: 412 cttactagcattcattctattacttttcgttgattctataaataaagtctacagcgtaga 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6833 cttactagcattcattctattacttttcgttgattctataaataaagtctacagcgtaga 6892 Query: 472 gggcgaattggataagctaaaggaagtaggtacaggtactcatcctcaaggaagaatgga 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6893 gggcgaattggataagctaaaggaagtaggtacaggtactcatcctcaaggaagaatgga 6952 Query: 532 gattttatcaagaaagttcttctggcagaggaacatgtacttaacgggcattactttgtt 591 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6953 gattttatcaagaaagttcttctggcagaggaacatgtacttaacgggcattactttgtt 7012 Query: 592 cttaacatttgtattgagccgtaccgttaaccttgtctgggagttattcgagctaaaaga 651 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7013 cttaacatttgtattgagccgtaccgttaaccttgtctgggagttattcgagctaaaaga 7072 Query: 652 ggattatcatttgatcttgaaatcggaggaagataaactggctcctcaac-aaaggcatt 710 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 7073 ggattatcatttgatcttgaaatcggaggaagataaactggctcctcaacaaaaggcatt 7132 Query: 711 agaaaaagaaattgaatctgtagatgaggaaattacaagattgaaggagcaggcctctgc 770 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7133 agaaaaagaaattgaatctgtagatgaggaaattacaagattgaaggagcaggcctctgc 7192 Query: 771 tttacagaaagagatggagtaaaaccagggaatgggatatgaccttttatgaccttacgt 830 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7193 tttacagaaagagatggagtaaaaccagggaatgggatatgaccttttatgaccttacgt 7252 Query: 831 ctatatgtatatatatatataagtaagcgaaaaatatttacatgtctttgattccatgaa 890 |||||||||||||||||||||| | |||||||||||||||||||||| |||||| ||| | Sbjct: 7253 ctatatgtatatatatatataactcagcgaaaaatatttacatgtctatgattcaatg-a 7311 Query: 891 acgttggaggacaaaactttcaggatagacgccgnacgtt 930 ||||| || ||| ||||||||||||||||||||| ||||| Sbjct: 7312 acgtt-gaagaccaaactttcaggatagacgccgcacgtt 7350 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,046 Number of Sequences: 1807 Number of extensions: 11046 Number of successful extensions: 776 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)