BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC15ZB11FM1.SCF screened BAC_end (959 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1321 1604 0.0 >3x_Contig1321 Length = 8217 Score = 1604 bits (809), Expect = 0.0 Identities = 865/878 (98%), Gaps = 5/878 (0%) Strand = Plus / Minus Query: 86 ttcacatctggaatggcgatgagatgagcttgagatgagctacgacaactagaataactt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3711 ttcacatctggaatggcgatgagatgagcttgagatgagctacgacaactagaataactt 3652 Query: 146 agcagtgagtactgttcattgttccttattataacttctacaggtgacatactatttatc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3651 agcagtgagtactgttcattgttccttattataacttctacaggtgacatactatttatc 3592 Query: 206 tagtgctattatttttcactcatttctactttgcgagaaagaatagaattcttgttgttc 265 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3591 tagtgctattattcttcactcatttctactttgcgagaaagaatagaattcttgttgttc 3532 Query: 266 tttgattgagtattaaggtaagtggaaaataaagagatatacggcattcgttaatatggc 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3531 tttgattgagtattaaggtaagtggaaaataaagagatatacggcattcgttaatatggc 3472 Query: 326 tgttaagaagtttagatcattcgatgattttgttcctacaattagtgatagcgaagaaga 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3471 tgttaagaagtttagatcattcgatgattttgttcctacaattagtgatagcgaagaaga 3412 Query: 386 tgttccagatttagatgcttctgatgacgaaatggaaaagaagccagtgaagtcctcaaa 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3411 tgttccagatttagatgcttctgatgacgaaatggaaaagaagccagtgaagtcctcaaa 3352 Query: 446 aactaagaacaaatctaaaaagaaggccaagcaacaacagggatctcacttggacgaaga 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3351 aactaagaacaaatctaaaaagaaggccaagcaacaacagggatctcacttggacgaaga 3292 Query: 506 tgtccatgaagatttgaatccagaattccaattctccattgacagcggagaagttaccac 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3291 tgtccatgaagatttgaatccagaattccaattctccattgacagcggagaagttaccac 3232 Query: 566 caactttgcaggctgggatttccaaggtgatgagaagagtgatgaagttgagaaaaaaga 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3231 caactttgcaggctgggatttccaaggtgatgagaagagtgatgaagttgagaaaaaaga 3172 Query: 626 tgtcgatctagatgggatcattagaagaaaaggtggtttgattatgatggctgctacagg 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3171 tgtcgatctagatgggatcattagaagaaaaggtggtttgattatgatggctgctacagg 3112 Query: 686 cagtgatgccgaagaaagcctatcagaagagtccgaagaagaaccagaagaaggagacga 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3111 cagtgatgccgaagaaagcctatcagaagagtccgaagaagaaccagaagaaggagacga 3052 Query: 746 acctggcgagagtgatgatgaagatgaattagctttggatgggttcggtatgggtgtcaa 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3051 acctggcgagagtgatgatgaagatgaattagctttggatgggttcggtatgggtgtcaa 2992 Query: 806 gagaaaggcaacagagg-aaatgaagaagatgaagaggatgaagaagaagaagatgacga 864 ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2991 gagaaaggcaacagaggaaaatgaagaagatgaagaggatgaagaagaagaggatgacga 2932 Query: 865 cgaagattgacgac-aaaagaccgaaatgagtcaagcagatttaggtagggnnaaagacg 923 |||||| ||||||| ||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 2931 cgaaga-tgacgacaaaaagaccgaaatgagtcaggcagatttaggtaagggaaaagacg 2873 Query: 924 -agatgaagactttgnagaagacactaaa-aagaaatg 959 |||||||||| ||| ||||||||||||| |||||||| Sbjct: 2872 aagatgaagacattgaagaagacactaaagaagaaatg 2835 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,806 Number of Sequences: 1807 Number of extensions: 10806 Number of successful extensions: 379 Number of sequences better than 1.0e-20: 1 length of query: 959 length of database: 10,358,551 effective HSP length: 16 effective length of query: 943 effective length of database: 10,329,639 effective search space: 9740849577 effective search space used: 9740849577 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)