BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC15ZB11FM1.SCF screened BAC_end
         (959 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1321                                                        1604   0.0  

>3x_Contig1321 
          Length = 8217

 Score = 1604 bits (809), Expect = 0.0
 Identities = 865/878 (98%), Gaps = 5/878 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   ttcacatctggaatggcgatgagatgagcttgagatgagctacgacaactagaataactt 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3711 ttcacatctggaatggcgatgagatgagcttgagatgagctacgacaactagaataactt 3652

                                                                        
Query: 146  agcagtgagtactgttcattgttccttattataacttctacaggtgacatactatttatc 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3651 agcagtgagtactgttcattgttccttattataacttctacaggtgacatactatttatc 3592

                                                                        
Query: 206  tagtgctattatttttcactcatttctactttgcgagaaagaatagaattcttgttgttc 265
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3591 tagtgctattattcttcactcatttctactttgcgagaaagaatagaattcttgttgttc 3532

                                                                        
Query: 266  tttgattgagtattaaggtaagtggaaaataaagagatatacggcattcgttaatatggc 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3531 tttgattgagtattaaggtaagtggaaaataaagagatatacggcattcgttaatatggc 3472

                                                                        
Query: 326  tgttaagaagtttagatcattcgatgattttgttcctacaattagtgatagcgaagaaga 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3471 tgttaagaagtttagatcattcgatgattttgttcctacaattagtgatagcgaagaaga 3412

                                                                        
Query: 386  tgttccagatttagatgcttctgatgacgaaatggaaaagaagccagtgaagtcctcaaa 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3411 tgttccagatttagatgcttctgatgacgaaatggaaaagaagccagtgaagtcctcaaa 3352

                                                                        
Query: 446  aactaagaacaaatctaaaaagaaggccaagcaacaacagggatctcacttggacgaaga 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3351 aactaagaacaaatctaaaaagaaggccaagcaacaacagggatctcacttggacgaaga 3292

                                                                        
Query: 506  tgtccatgaagatttgaatccagaattccaattctccattgacagcggagaagttaccac 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3291 tgtccatgaagatttgaatccagaattccaattctccattgacagcggagaagttaccac 3232

                                                                        
Query: 566  caactttgcaggctgggatttccaaggtgatgagaagagtgatgaagttgagaaaaaaga 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3231 caactttgcaggctgggatttccaaggtgatgagaagagtgatgaagttgagaaaaaaga 3172

                                                                        
Query: 626  tgtcgatctagatgggatcattagaagaaaaggtggtttgattatgatggctgctacagg 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3171 tgtcgatctagatgggatcattagaagaaaaggtggtttgattatgatggctgctacagg 3112

                                                                        
Query: 686  cagtgatgccgaagaaagcctatcagaagagtccgaagaagaaccagaagaaggagacga 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3111 cagtgatgccgaagaaagcctatcagaagagtccgaagaagaaccagaagaaggagacga 3052

                                                                        
Query: 746  acctggcgagagtgatgatgaagatgaattagctttggatgggttcggtatgggtgtcaa 805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3051 acctggcgagagtgatgatgaagatgaattagctttggatgggttcggtatgggtgtcaa 2992

                                                                        
Query: 806  gagaaaggcaacagagg-aaatgaagaagatgaagaggatgaagaagaagaagatgacga 864
            ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2991 gagaaaggcaacagaggaaaatgaagaagatgaagaggatgaagaagaagaggatgacga 2932

                                                                        
Query: 865  cgaagattgacgac-aaaagaccgaaatgagtcaagcagatttaggtagggnnaaagacg 923
            |||||| ||||||| ||||||||||||||||||| ||||||||||||| ||  |||||||
Sbjct: 2931 cgaaga-tgacgacaaaaagaccgaaatgagtcaggcagatttaggtaagggaaaagacg 2873

                                                  
Query: 924  -agatgaagactttgnagaagacactaaa-aagaaatg 959
             |||||||||| ||| ||||||||||||| ||||||||
Sbjct: 2872 aagatgaagacattgaagaagacactaaagaagaaatg 2835


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,806
Number of Sequences: 1807
Number of extensions: 10806
Number of successful extensions: 379
Number of sequences better than 1.0e-20: 1
length of query: 959
length of database: 10,358,551
effective HSP length: 16
effective length of query: 943
effective length of database: 10,329,639
effective search space: 9740849577
effective search space used: 9740849577
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)