BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC15ZD06FM1.SCF screened BAC_end (974 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1020 712 0.0 3x_Contig602 151 3e-36 >3x_Contig1020 Length = 4879 Score = 712 bits (359), Expect = 0.0 Identities = 390/399 (97%), Gaps = 1/399 (0%) Strand = Plus / Plus Query: 572 tcgtggaatggatgatcccagggttgttgaaggagccaaatgggtcggaccctttgaata 631 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1 tcgtggaatggatgatcccagg-ttgttgaaggagccaaatgggtcggaccctttgaata 59 Query: 632 acgaagcagcaacgttgcaactgaaggataaagatatgtatgaacaaaagatacatgaat 691 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 acgaagcagcaacgttgcaactgaaggataaagatatgtatgaacaaaagatacatgaat 119 Query: 692 acatcaacaaatacgctaccaaggaaaaatacatacagcagtttgggaaatggaacagtt 751 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 acatcaacaaatacgctaccaaggaaaaatacatacagcagtttgggaaatggaacagtt 179 Query: 752 ccgatgatacagatgatgaggatgaggatgcggatatggacgaatcagacgacgagcaag 811 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 ccgatgatacagatgatgaggatgaggatgcggatatggacgaatcagacgacgagcaag 239 Query: 812 cacatgacgataacgatagtatggaactaagtgatatagcagtcagtgacgacgacgatt 871 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 240 cacatgacgataacgatagtatggaactaagtgatatagaagtcagtgacgacgacgatt 299 Query: 872 gaaatttgaaagttaaaagttaatgctcatattcactttatccatcaaaacttgcatatt 931 |||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||| Sbjct: 300 gaaatttgaaagttaaaagttaatgctcatatccacttcatccatcaaaactagcatata 359 Query: 932 ctgcatttacttccactattgatatctaaacctgaactt 970 ||||||| ||| | ||||||||||||||||||||||||| Sbjct: 360 ctgcattcactccaactattgatatctaaacctgaactt 398 >3x_Contig602 Length = 2648 Score = 151 bits (76), Expect = 3e-36 Identities = 79/80 (98%) Strand = Plus / Plus Query: 88 attaattaaagatgaggtatgttcgttgaaatggagttttttcttttttttaagatgctg 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2565 attaattaaagatgaggtatgttcgttgaaatggagttttttcttttttttaagatgctg 2624 Query: 148 tgtctcagtatcttttatga 167 |||||||||||| ||||||| Sbjct: 2625 tgtctcagtatcctttatga 2644 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7748 Number of Sequences: 1807 Number of extensions: 7748 Number of successful extensions: 106 Number of sequences better than 1.0e-20: 2 length of query: 974 length of database: 10,358,551 effective HSP length: 16 effective length of query: 958 effective length of database: 10,329,639 effective search space: 9895794162 effective search space used: 9895794162 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)