BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC15ZD10RM1.SCF screened BAC_end
         (906 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1652                                                        1576   0.0  

>3x_Contig1652 
          Length = 14842

 Score = 1576 bits (795), Expect = 0.0
 Identities = 845/859 (98%), Gaps = 2/859 (0%)
 Strand = Plus / Plus

                                                                         
Query: 48    cttcagcaatggaacaatcgatttaaga-cataggaagcggaaggagaaggctggtgcca 106
             ||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||
Sbjct: 9186  cttcagcaatggaacaatcgaataaagaacataggaagcggaaggagaaggctggtgcca 9245

                                                                         
Query: 107   agaagaagttacattctcagggccacaatgctaaggcctttgctgtctccgctccgggga 166
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9246  agaagaagttacattctcagggccacaatgctaaggcctttgctgtctccgctccgggga 9305

                                                                         
Query: 167   aaatggctaagcagatgcaacgtacgggtgataagaatgagaagaagttgcatgttccga 226
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9306  aaatggctaagcagatgcaacgtacgggtgataagaatgagaagaagttgcatgttccga 9365

                                                                         
Query: 227   tggtggatcgtaccccagatgatgatcctcctccgatcattattgctgttgttggtcctc 286
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9366  tggtggatcgtaccccagatgatgatcctcctccgatcattattgctgttgttggtcctc 9425

                                                                         
Query: 287   caggtaccggtaagactactttgatcaaatcgttagtgagaaggttgacaaagaccactt 346
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9426  caggtaccggtaagactactttgatcaaatcgttagtgagaaggttgacaaagaccactt 9485

                                                                         
Query: 347   tatccgaaattaacggtcctattactgttgtttctggtaagcgtagaaggctgactttta 406
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9486  tatccgaaattaacggtcctattactgttgtttctggtaagcgtagaaggctgactttta 9545

                                                                         
Query: 407   tcgaatgtcctgcggatgatttgaattccatgatcgatatttcaaaagtggccgatttgg 466
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9546  tcgaatgtcctgcggatgatttgaattccatgatcgatatttcaaaagtggccgatttgg 9605

                                                                         
Query: 467   tgcttttgatgatggatggtaatttcgggtttgaaatggagaccatggaattcttgaatt 526
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9606  tgcttttgatgatggatggtaatttcgggtttgaaatggagaccatggaattcttgaatt 9665

                                                                         
Query: 527   tggctcaacatcatggtatgcctcgtgtactaggtgtcgctacacatttggatcttttca 586
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9666  tggctcaacatcatggtatgcctcgtgtactaggtgtcgctacacatttggatcttttca 9725

                                                                         
Query: 587   aatcccagtcaacattgcgtgcctctaagaaatctttgaaacataggttctggaccgaag 646
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9726  aatcccagtcaacattgcgtgcctctaagaaatctttgaaacataggttctggaccgaag 9785

                                                                         
Query: 647   tgtatcagggtgccaagcttttctacctttctggtgttattaacggtcgttatccagata 706
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9786  tgtatcagggtgccaagcttttctacctttctggtgttattaacggtcgttatccagata 9845

                                                                         
Query: 707   gagagattttgaacttgtcaaggtttataagtgttatgaagttcagaccttttgcatgga 766
             ||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||
Sbjct: 9846  gagagattttgaacttgtcaaggtttataagtgttatgaagttcagacctttgcaatgga 9905

                                                                         
Query: 767   gaaacgaacatccttatttattgcccgatagaatatccgatttaactcattcagaactct 826
             ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 9906  gaaacgaacatccttatttattggccgatagaatatccgatttaactcatccagaactct 9965

                                                                         
Query: 827   ttacatcgtagggtatgcatatagatcgtaaagtcgccatctatggttatttacacggta 886
             |   |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9966  tacaatcgaagggtatgcatatagatcgtaaagtcgccatctatggttatttacacggta 10025

                                
Query: 887   cttcgnttaccttcgactc 905
             || || |||||||||||||
Sbjct: 10026 ctccg-ttaccttcgactc 10043


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6265
Number of Sequences: 1807
Number of extensions: 6265
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)