BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC15ZD10RM1.SCF screened BAC_end (906 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1652 1576 0.0 >3x_Contig1652 Length = 14842 Score = 1576 bits (795), Expect = 0.0 Identities = 845/859 (98%), Gaps = 2/859 (0%) Strand = Plus / Plus Query: 48 cttcagcaatggaacaatcgatttaaga-cataggaagcggaaggagaaggctggtgcca 106 ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 9186 cttcagcaatggaacaatcgaataaagaacataggaagcggaaggagaaggctggtgcca 9245 Query: 107 agaagaagttacattctcagggccacaatgctaaggcctttgctgtctccgctccgggga 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9246 agaagaagttacattctcagggccacaatgctaaggcctttgctgtctccgctccgggga 9305 Query: 167 aaatggctaagcagatgcaacgtacgggtgataagaatgagaagaagttgcatgttccga 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9306 aaatggctaagcagatgcaacgtacgggtgataagaatgagaagaagttgcatgttccga 9365 Query: 227 tggtggatcgtaccccagatgatgatcctcctccgatcattattgctgttgttggtcctc 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9366 tggtggatcgtaccccagatgatgatcctcctccgatcattattgctgttgttggtcctc 9425 Query: 287 caggtaccggtaagactactttgatcaaatcgttagtgagaaggttgacaaagaccactt 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9426 caggtaccggtaagactactttgatcaaatcgttagtgagaaggttgacaaagaccactt 9485 Query: 347 tatccgaaattaacggtcctattactgttgtttctggtaagcgtagaaggctgactttta 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9486 tatccgaaattaacggtcctattactgttgtttctggtaagcgtagaaggctgactttta 9545 Query: 407 tcgaatgtcctgcggatgatttgaattccatgatcgatatttcaaaagtggccgatttgg 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9546 tcgaatgtcctgcggatgatttgaattccatgatcgatatttcaaaagtggccgatttgg 9605 Query: 467 tgcttttgatgatggatggtaatttcgggtttgaaatggagaccatggaattcttgaatt 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9606 tgcttttgatgatggatggtaatttcgggtttgaaatggagaccatggaattcttgaatt 9665 Query: 527 tggctcaacatcatggtatgcctcgtgtactaggtgtcgctacacatttggatcttttca 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9666 tggctcaacatcatggtatgcctcgtgtactaggtgtcgctacacatttggatcttttca 9725 Query: 587 aatcccagtcaacattgcgtgcctctaagaaatctttgaaacataggttctggaccgaag 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9726 aatcccagtcaacattgcgtgcctctaagaaatctttgaaacataggttctggaccgaag 9785 Query: 647 tgtatcagggtgccaagcttttctacctttctggtgttattaacggtcgttatccagata 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9786 tgtatcagggtgccaagcttttctacctttctggtgttattaacggtcgttatccagata 9845 Query: 707 gagagattttgaacttgtcaaggtttataagtgttatgaagttcagaccttttgcatgga 766 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9846 gagagattttgaacttgtcaaggtttataagtgttatgaagttcagacctttgcaatgga 9905 Query: 767 gaaacgaacatccttatttattgcccgatagaatatccgatttaactcattcagaactct 826 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 9906 gaaacgaacatccttatttattggccgatagaatatccgatttaactcatccagaactct 9965 Query: 827 ttacatcgtagggtatgcatatagatcgtaaagtcgccatctatggttatttacacggta 886 | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9966 tacaatcgaagggtatgcatatagatcgtaaagtcgccatctatggttatttacacggta 10025 Query: 887 cttcgnttaccttcgactc 905 || || ||||||||||||| Sbjct: 10026 ctccg-ttaccttcgactc 10043 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6265 Number of Sequences: 1807 Number of extensions: 6265 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 906 length of database: 10,358,551 effective HSP length: 16 effective length of query: 890 effective length of database: 10,329,639 effective search space: 9193378710 effective search space used: 9193378710 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)