BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC15ZD11FM1.SCF screened BAC_end (967 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig953 1528 0.0 >3x_Contig953 Length = 3904 Score = 1528 bits (771), Expect = 0.0 Identities = 808/817 (98%), Gaps = 3/817 (0%) Strand = Plus / Plus Query: 152 tgtgttcacgtgactcgttcagattaatctaggccacttggaaactaatcctcgaagttc 211 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 tgtgttcacgtgactcgttcagattaatctagcccacttggaaactaatcctcgaagttc 60 Query: 212 aatgatagcctactagcacgttttaattaccttttaccgctgtaaacaccatttgtttat 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aatgatagcctactagcacgttttaattaccttttaccgctgtaaacaccatttgtttat 120 Query: 272 ggcaccgagtattatctctttaactgatatcctgggcggttattggcgtttgtttttctg 331 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggcaccgagtattatctctttaactgatatcctgggcggttattggcgtttgtttttctg 180 Query: 332 ttttcaaaacacgtaaatatccaataaaaacgactatttaatatagactggtttcaaaga 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttttcaaaacacgtaaatatccaataaaaacgactatttaatatagactggtttcaaaga 240 Query: 392 tggatacgaaccacattcaagtccatgaccaacaacaggtgaaagcagtcatttgcagta 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tggatacgaaccacattcaagtccatgaccaacaacaggtgaaagcagtcatttgcagta 300 Query: 452 catcgaatactgttcaaggtaccgtgagaggtgtttcctgattttacttggtgctttact 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 catcgaatactgttcaaggtaccgtgagaggtgtttcctgattttacttggtgctttact 360 Query: 512 tccatattttttactctgatttaaagagaagggagacatggatagatccagattgtacaa 571 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tccatattttttactctgatttaaagagaagggagacatggatagatccagattgtacaa 420 Query: 572 caaaagtattcgcgaagcgtatgaaaatatggtgaagggagccggagctccgcacttaag 631 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 caaaagtattcgcgaagcgtatgaaaatatggtgaagggagccggagctccgcacttaag 480 Query: 632 cgctgatcatgataattccaaggttagcagatattctgcaagtataattcatgaggataa 691 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 cgctgatcatgataattccaaggttagcagatattctgcaagtataattcatgaggataa 540 Query: 692 tcggcgagaaggattggaaaatagtgagtttttagacaacgagtcattgaatgaatatga 751 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 541 tcggcgagaaggattggaaaatagtgagttttcagacaacgagtcattgaatgaatatga 600 Query: 752 tgatgaaggggaagaaaatgatgcggatgacgatggtgaagcagagaacgattatacccc 811 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 601 tgatgaaggggaagaaaatgatgcggatgacgatggtgaagcagagaacgattatacaca 660 Query: 812 atttaagaagtcattaattcaagatgatgagtggcttgatgatgaatcgnatacggacta 871 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 661 atttaagaagtcattaattcaagatgatgagtggcttgatgatgaatcggatacggacta 720 Query: 872 tacagaaggaggccgatcagagctttttactgnagaaggacaattgat-atgatagtgac 930 ||||||| |||||||||||||||||||||||| |||||||||| |||| ||||||||||| Sbjct: 721 tacagaa-gaggccgatcagagctttttactggagaaggacaa-tgataatgatagtgac 778 Query: 931 gatgaaagtcgtcgctacgtgtgcccaggttctgaat 967 ||||||||||||||||||||||||||||||||||||| Sbjct: 779 gatgaaagtcgtcgctacgtgtgcccaggttctgaat 815 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6443 Number of Sequences: 1807 Number of extensions: 6443 Number of successful extensions: 35 Number of sequences better than 1.0e-20: 1 length of query: 967 length of database: 10,358,551 effective HSP length: 16 effective length of query: 951 effective length of database: 10,329,639 effective search space: 9823486689 effective search space used: 9823486689 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)