BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC15ZD11RM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig330 1614 0.0 >3x_Contig330 Length = 1954 Score = 1614 bits (814), Expect = 0.0 Identities = 862/872 (98%), Gaps = 5/872 (0%) Strand = Plus / Minus Query: 54 ctttcaataaaagggtttatctttttcctagcaattgtgtttaaaactcttcaaaaatca 113 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1163 ctttcaataaaagggtttatctttt-cctagcaattgtgtttaaaactcttcaaaaatca 1105 Query: 114 gaagtgaacaagaatatggcataaagatactgtaatgaagatct-ctttaatgcaataaa 172 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1104 gaagtgaacaagaatatggcataaagatactgtaatgaagatcttctttaatgcaataaa 1045 Query: 173 gtgtttggaatgacaatcgatattggtagtattgagattatctatcatgtctataaattg 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1044 gtgtttggaatgacaatcgatattggtagtattgagattatctatcatgtctataaattg 985 Query: 233 agatgatattgaatttacttttttccttttcattgttgtcaaatcaagattataaaatcc 292 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 984 agatgatatggaatttacttttt-ccttttcattgttgtcaaatcaagattataaaatcc 926 Query: 293 aatgtcaatttaaaatataaaatctatgaaggaaagcgatgacatagaagatgcataaat 352 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 925 aatgtcaattgaaaatataaaatctatgaaggaaagcgatgacatagaagatgcataaat 866 Query: 353 tatcaatgttagtcaaattttacataaaagcaatctcaaattaacaacgaatctaagcga 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 865 tatcaatgttagtcaaattttacataaaagcaatctcaaattaacaacgaatctaagcga 806 Query: 413 ctgttcacttcatcgcgtttggtattatttgcctcttcctccaaaactccgtaaatgatg 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 805 ctgttcacttcatcgcgtttggtattatttgcctcttcctccaaaactccgtaaatgatg 746 Query: 473 tctttgataatggtagcacctttttcatagtcactaggttcgttgaaaacctgaacagaa 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 tctttgataatggtagcacctttttcatagtcactaggttcgttgaaaacctgaacagaa 686 Query: 533 aatctaataaacaagtgactgttgttaatttggaatggcgcataacatttatactctgcg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 685 aatctaataaacaagtgactgttgttaatttggaatggcgcataacatttatactctgcg 626 Query: 593 agcatgatcttatcacatttactcttaaagtttaggaaataaattctatcagtactcatc 652 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 625 agcatgatcttatcacatttactcttaaagtttaggaaataaattctatcagtactcatc 566 Query: 653 ttttcaatgagatgttgacattccgatttaatcggtaattctatacagaataatccgggt 712 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 ttttcaatgagatgttgacattccgatttaatcggtaattctatacagaataatccgggt 506 Query: 713 gaacgtaaagaattagtcgagttttcaagtagaacagatccttggccaaaaacctccaaa 772 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 505 gaacgtaaagaattagtcgagttttcaagtagaacagatccttggccaaaaacctccaaa 446 Query: 773 atctttggaatagcagcttcttgcanatcccattgatattctcgaatcttttcttcaccg 832 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 445 atctttggaatagcagcttcttgcaaatcccattgatattctcgaatcttttcttcaccg 386 Query: 833 ccgcatatgtccttacggaatttcaatgcttccttc-cagcanaata-gacgagtacgaa 890 |||||||||||||||||||||||||||||||||| | ||||| |||| |||||||||||| Sbjct: 385 ccgcatatgtccttacggaatttcaatgcttcctccacagcaaaataggacgagtacgaa 326 Query: 891 acggtgccgataaaggcaaatttgttaacaag 922 |||||||||||||||||||||||||||||||| Sbjct: 325 acggtgccgataaaggcaaatttgttaacaag 294 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8383 Number of Sequences: 1807 Number of extensions: 8383 Number of successful extensions: 61 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)