BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC15ZE01RM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1364 1229 0.0 >3x_Contig1364 Length = 7464 Score = 1229 bits (620), Expect = 0.0 Identities = 687/703 (97%), Gaps = 5/703 (0%) Strand = Plus / Plus Query: 50 tcaaaatcctgtttggattt-tgattcgctttttcaaataacatatccatcataagcttg 108 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 6730 tcaaaatcctgtttggagccatgattcgctttttcaaataacatatccatcataagcttg 6789 Query: 109 gacttattaagttcttccatttcctcatcttctgatcttggtttataattgacccctgct 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6790 gacttattaagttcttccatttcctcatcttctgatcttggtttataattgacccctgct 6849 Query: 169 ctcatcaactccttatcgttaccatgttcacgaaacctttgcgtcgttgtctcgaaatat 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6850 ctcatcaactccttatcgttaccatgttcacgaaacctttgcgtcgttgtctcgaaatat 6909 Query: 229 tgcctagctttccttctgaacccaaataactctcgatttaacgaagaagtcttgctcgca 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6910 tgcctagctttccttctgaacccaaataactctcgatttaacgaagaagtcttgctcgca 6969 Query: 289 gtcgaatttgtttgaaaagtacctaaattagaggccttcttttgtccatataacgttgct 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6970 gtcgaatttgtttgaaaagtacctaaattagaggccttcttttgtccatataacgttgct 7029 Query: 349 tcaatttgagggtccaagaaactaccttctgatatcatttaagctattgtattatccctt 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7030 tcaatttgagggtccaagaaactaccttctgatatcatttaagctattgtattatccctt 7089 Query: 409 tacaatgaaattgttgaaaaaaatgagtgactatggttgagtagcaattgtttgtttgat 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7090 tacaatgaaattgttgaaaaaaatgagtgactatggttgagtagcaattgtttgtttgat 7149 Query: 469 ttattggctatttggtaaaagttgtgtgtattaagttacaaatccgtttatatataatgt 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7150 ttattggctatttggtaaaagttgtgtgtattaagttacaaatccgtttatatataatgt 7209 Query: 529 tcggttggtacagatatgacaactgttctcacaatttaacctgcttttatagtccgattt 588 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 7210 tcggttggtacagatatgacaactgttctcacaatttaacctgcttttatagtccga-tt 7268 Query: 589 ctttangtttgtgacactgacctcacggtgtcagtttttgcacatagtgatatatcaaga 648 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7269 ctttaggtttgtgacactgacctcacggtgtcagtttttgcacatagtgatatatcaaga 7328 Query: 649 aaaagatttgtttttgcgaaaggaatactgacatgaatgtcagacttttaatacgatgtg 708 |||||||||| | |||||||||||||||||||||||| |||||||| | || |||||||| Sbjct: 7329 aaaagatttg-tattgcgaaaggaatactgacatgaaagtcagactatgaaaacgatgtg 7387 Query: 709 cgaccctcttttcataaaagattttacagtcccttaagaatca 751 |||||||| ||||| ||||||||||||||||| ||||||||| Sbjct: 7388 cgaccctc-tttcaataaagattttacagtccc-taagaatca 7428 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8000 Number of Sequences: 1807 Number of extensions: 8000 Number of successful extensions: 58 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)