BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC15ZE03FM1.SCF screened BAC_end (948 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1693 1568 0.0 >3x_Contig1693 Length = 15531 Score = 1568 bits (791), Expect = 0.0 Identities = 846/858 (98%), Gaps = 5/858 (0%) Strand = Plus / Plus Query: 89 ttatatgggatcctaatggaatccatctcagggacagtatgaaggaaatcaaatgcaatg 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78 ttatatgggatcctaatggaatccatctcagggacagtatgaaggaaatcaaatgcaatg 137 Query: 149 aagtggatttcacagttttcaagtccttgacctcagatgatttgtctaccttcaattatc 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 aagtggatttcacagttttcaagtccttgacctcagatgatttgtctaccttcaattatc 197 Query: 209 aatacgaatctttt-taatttggtccaaacttataattgatggattattcatgcttttca 267 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 aatacgaatcttccataatttggtccaaacttataattgatggattattcatgcttttca 257 Query: 268 cgggaaatttatacaaaccatggtatcatcttgagttggctccaattgaacatccggatt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 cgggaaatttatacaaaccatggtatcatcttgagttggctccaattgaacatccggatt 317 Query: 328 ttgttcaatatttctccgaaagaacccacgatatataccagcgtttaaaagcgatagtgg 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 318 ttgttcaatatttctccgaaagaacccacgatatataccagcgtttaaaagcgatagtgg 377 Query: 388 aactatttcctactcaggattccatttatcaaaatgccaatattttgatagaccttcggt 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 aactatttcctactcaggattccatttatcaaaatgccaatattttgatagaccttcggt 437 Query: 448 tggactacttcaatgacacggactttatacggcaactatcacagcattggttcgagaaac 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 tggactacttcaatgacacggactttatacggcaactatcacagcattggttcgagaaac 497 Query: 508 ctgtcatacccagttatatagaccttagtttcttattttaaacgagatatacgtttaaaa 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 498 ctgtcatacccagttatatagaccttagtttcttattttaaacgagatatacgtttaaaa 557 Query: 568 caggtttctacttaaatatacatagtttaattaactctccgaaagtatacatctaaatta 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 caggtttctacttaaatatacatagtttaattaactctccgaaagtatacatctaaatta 617 Query: 628 tgagccaaacaactgacccaataattgttataccaattacagcggtgatgataccagcac 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 618 tgagccaaacaactgacccaataattgttataccaattacagcggtgatgataccagcac 677 Query: 688 cggcttggtcacctttaccgattgttaagggtgccaaattagttggagattgttcggtac 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 678 cggcttggtcacctttaccgattgttaagggtgccaaattagttggagattgttcggtac 737 Query: 748 ctgcagctgggttaccagccgaagtaccaccgtcgtcagctgtgtatggagcangcctgt 807 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 738 ctgcagctgggttaccagccgaagtaccaccgtcgtcagctgtgtatggagcaggcctgt 797 Query: 808 tcaaacatc-tagtttttgcataacttct-atgcagccatttgttcacctaaaccatatt 865 |||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 798 ccaaacatcttaggttttgcataacttctaatgcagccatttgttcacctaaaccatatt 857 Query: 866 taccgtcccatccnaccgtagaa-cagttcaaaccacaagtatggccatcagtaccacct 924 ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 858 taccgtcccatcc-accgtagaaccagttcaaaccacaagtatggccatcagtaccacct 916 Query: 925 tgacatgaatcagcagca 942 |||||||||||||||| Sbjct: 917 gaacatgaatcagcagca 934 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5752 Number of Sequences: 1807 Number of extensions: 5752 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 948 length of database: 10,358,551 effective HSP length: 16 effective length of query: 932 effective length of database: 10,329,639 effective search space: 9627223548 effective search space used: 9627223548 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)