BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC15ZE05FM1.SCF screened BAC_end
         (956 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1510                                                        1449   0.0  

>3x_Contig1510 
          Length = 10278

 Score = 1449 bits (731), Expect = 0.0
 Identities = 842/870 (96%), Gaps = 7/870 (0%)
 Strand = Plus / Minus

                                                                        
Query: 87   cactctttgttacggttacagcaggttagtctgaccaggtatagaactgttagcaaacct 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9972 cactctttgttacggttacagcaggttagtctgaccaggtatagaactgttagcaaacct 9913

                                                                        
Query: 147  aaggctcctcctggtggtagagggacgtttggcgggatattggtttcacaatcgctttta 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9912 aaggctcctcctggtggtagagggacgtttggcgggatattggtttcacaatcgctttta 9853

                                                                        
Query: 207  gcttctttgcagacaattccggtagatttcaacccgagttcgttgcattgttatttcctt 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9852 gcttctttgcagacaattccggtagatttcaacccgagttcgttgcattgttatttcctt 9793

                                                                        
Query: 267  atcggaggtaacccagaccatgatatcgattacgatgtagaatcattacgttctggtaag 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9792 atcggaggtaacccagaccatgatatcgattacgatgtagaatcattacgttctggtaag 9733

                                                                        
Query: 327  aatttcattcataaacaggtaaaggcgtaccagtttgacaaactgatattcatttcgacg 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9732 aatttcattcataaacaggtaaaggcgtaccagtttgacaaactgatattcatttcgacg 9673

                                                                        
Query: 387  atcttgttctacagacaaccggaccctgataagctacatgcgttgaatagacttggcaag 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9672 atcttgttctacagacaaccggaccctgataagctacatgcgttgaatagacttggcaag 9613

                                                                        
Query: 447  ttgcccaagttaccagatttcaagaaattccgtgaatcgacacagttgttcgagaaccag 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9612 ttgcccaagttaccagatttcaagaaattccgtgaatcgacacagttgttcgagaaccag 9553

                                                                        
Query: 507  gtgatgggcaagctgcccaatttcaaacgtgtatcaacagtatttcaaggctctgatgcc 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9552 gtgatgggcaagctgcccaatttcaaacgtgtatcaacagtatttcaaggctctgatgcc 9493

                                                                        
Query: 567  gagaccaagaagctccgtgatcgattcgaaacaggtaccgttgattaccggttcccggac 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9492 gagaccaagaagctccgtgatcgattcgaaacaggtaccgttgattaccggttcccggac 9433

                                                                        
Query: 627  aacttctttgttaatgagtcagattcagatgagttggattattacttacgtgtgcgtgag 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9432 aacttctttgttaatgagtcagattcagatgagttggattattacttacgtgtgcgtgag 9373

                                                                        
Query: 687  aatatacctgcaagtggagttcctgttttctcccc-aacgcagatattagcccggagaat 745
            ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||
Sbjct: 9372 aatatacctgcaagtggagttcctggtttctccccaaacgcagatataagcccggagaat 9313

                                                                        
Query: 746  gatgtttcgtttaactatgtcgcaattgcgtatctttctgactcgtacgtttcttatatc 805
            ||||||   ||||||||||||||| |||||||||||||||||||||||| ||||  ||||
Sbjct: 9312 gatgttcgttttaactatgtcgcatttgcgtatctttctgactcgtacg-ttctattatc 9254

                                                                        
Query: 806  attggcatttttccattatcttcccatgtattcacacaagtttcagtggggtctttgaat 865
            |||| ||||||||||| ||||||| ||||||||||||||| |||||| | ||||||| ||
Sbjct: 9253 attgccatttttccataatcttccaatgtattcacacaag-ttcagt-gtgtctttggat 9196

                                                                        
Query: 866  catactatccatttccatcaactcccccagagtaaaccacttggttgtttgccaaatttt 925
            ||||||||||||||||||||||||||| || |||||| || ||| ||||||||||||| |
Sbjct: 9195 catactatccatttccatcaactccccaag-gtaaacgac-tggatgtttgccaaattgt 9138

                                          
Query: 926  tcaattcccaggntccattatgataagcat 955
            |||| |||||||   ||| |||||||||||
Sbjct: 9137 tcaa-tcccaggtctcatcatgataagcat 9109


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5679
Number of Sequences: 1807
Number of extensions: 5679
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 956
length of database: 10,358,551
effective HSP length: 16
effective length of query: 940
effective length of database: 10,329,639
effective search space: 9709860660
effective search space used: 9709860660
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)