BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC15ZE08RM1.SCF screened BAC_end (912 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1203 1641 0.0 >3x_Contig1203 Length = 4988 Score = 1641 bits (828), Expect = 0.0 Identities = 856/863 (99%), Gaps = 2/863 (0%) Strand = Plus / Plus Query: 47 gcttgacattacgagngctggacttttccgatatcaattaatagacctttactcttttgg 106 ||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 3667 gcttgacattacgag-gctggacatc-ccgatatcaattaatagacctttactcttttgg 3724 Query: 107 gaaagggagaaaattgaataggtttagtggcaatggcggttaaaatccctaaatgaaggt 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3725 gaaagggagaaaattgaataggtttagtggcaatggcggttaaaatccctaaatgaaggt 3784 Query: 167 agggaaggaggcttatcttgcagacaagaaaatacattgtagagcagggaaacttaatac 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3785 agggaaggaggcttatcttgcagacaagaaaatacattgtagagcagggaaacttaatac 3844 Query: 227 attttttgctccttcggattcagatgcccaaataagtctggaaagatgacatatcacttt 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3845 attttttgctccttcggattcagatgcccaaataagtctggaaagatgacatatcacttt 3904 Query: 287 aaaataccatatcgatacgtaactgtgcattcttttataggttactatcgtgtatagtag 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3905 aaaataccatatcgatacgtaactgtgcattcttttataggttactatcgtgtatagtag 3964 Query: 347 ttttatagatcatggttctccattatgttggtacggagaagcagtgagtaacttaaggaa 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3965 ttttatagatcatggttctccattatgttggtacggagaagcagtgagtaacttaaggaa 4024 Query: 407 gtaatttgtcatgcgcgatgcatcgatcttccagcatttttgtgctttaagttcattagt 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4025 gtaatttgtcatgcgcgatgcatcgatcttccagcatttttgtgctttaagttcattagt 4084 Query: 467 tagcctgtaaatcaaattcttagtgtattaatccagaggaatcttctcactttgcaggtt 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4085 tagcctgtaaatcaaattcttagtgtattaatccagaggaatcttctcactttgcaggtt 4144 Query: 527 acggaagagaagttcattcattgtgagcacctcgactaggattaaacggtgaatccaaag 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4145 acggaagagaagttcattcattgtgagcacctcgactaggattaaacggtgaatccaaag 4204 Query: 587 gtgatttgcaacagaatcctaatttaccgatgcatagcagtcatgcgtcgtccaataatt 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4205 gtgatttgcaacagaatcctaatttaccgatgcatagcagtcatgcgtcgtccaataatt 4264 Query: 647 aacatattgtcgtacttcatccaatttacacataaatgattcatttactgccataagggg 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4265 aacatattgtcgtacttcatccaatttacacataaatgattcatttactgccataagggg 4324 Query: 707 ggcagggcgtntctactgaagctattaaaggaaattcggtattatctatatcggtaagtt 766 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4325 ggcagggcgtttctactgaagctattaaaggaaattcggtattatctatatcggtaagtt 4384 Query: 767 tagccgccatattttcttgaaaaattttcctttcagttgttgtagccaaactgtggggaa 826 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4385 tagccgccatattttcttgaaaaattttcctttcagttgttgtagccaaactgtggggaa 4444 Query: 827 aggagaactatggtcagaagcgatcgcaatgtttaccactcacatcatgacgtgcaatat 886 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4445 gggagaactatggtcagaagcgatcgcaatgtttaccactcacatcatgacgtgcaatag 4504 Query: 887 gtgcgccatattgggtcatatat 909 ||||||||||||||||||||||| Sbjct: 4505 gtgcgccatattgggtcatatat 4527 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5832 Number of Sequences: 1807 Number of extensions: 5832 Number of successful extensions: 28 Number of sequences better than 1.0e-20: 1 length of query: 912 length of database: 10,358,551 effective HSP length: 16 effective length of query: 896 effective length of database: 10,329,639 effective search space: 9255356544 effective search space used: 9255356544 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)