BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC15ZF05FM1.SCF screened BAC_end (967 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1769 1653 0.0 >3x_Contig1769 Length = 25795 Score = 1653 bits (834), Expect = 0.0 Identities = 871/880 (98%), Gaps = 4/880 (0%) Strand = Plus / Plus Query: 88 atattgcttttcatgctacattagccactaatgtgaaaagataacatcgaaactctttag 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13407 atattgcttttcatgctacattagccactaatgtgaaaagataacatcgaaactctttag 13466 Query: 148 attacctttaaatgcctctcttcgtggaagtcggtccaatatcaccaagaccacgacgaa 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13467 attacctttaaatgcctctcttcgtggaagtcggtccaatatcaccaagaccacgacgaa 13526 Query: 208 tagaggcgcaggagacattcttccatctgtcaaaagaagtgaatatgctgcagccagaca 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13527 tagaggcgcaggagacattcttccatctgtcaaaagaagtgaatatgctgcagccagaca 13586 Query: 268 accaataacacagcattacataagagaagaggtactttttctatcaccgactggaattta 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13587 accaataacacagcattacataagagaagaggtactttttctatcaccgactggaattta 13646 Query: 328 aaagccgtccggaaaatcccattcttagattggacaatctgatgtttaactcttgctttt 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13647 aaagccgtccggaaaatcccattcttagattggacaatctgatgtttaactcttgctttt 13706 Query: 388 tttctctcccttagcagctcttgctaggaagcaattatcttgtgcaggcttaaagtttca 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13707 tttctctcccttagcagctcttgctaggaagcaattatcttgtgcaggcttaaagtttca 13766 Query: 448 tggagaaccctattgacctggacctgtgcattgtatttctaatcgctacgcgttctgtgc 507 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 13767 tggagaaccctattgacctggacctgtgcattgtatttctaaagtctacgcgttctgtgc 13826 Query: 508 agttatactgagacatcaaatatggctgtgaagaaggagttccaataaagttatttttgg 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13827 agttatactgagacatcaaatatggctgtgaagaaggagttccaataaagttatttttgg 13886 Query: 568 attagctaatgtcagggacaaaggaaatgaatgcagctctcccttgcaccagagaatggt 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13887 attagctaatgtcagggacaaaggaaatgaatgcagctctcccttgcaccagagaatggt 13946 Query: 628 ctatgggagtgcaatcttccgtcgtccattgacaccagctcggttcgtacagaaagataa 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13947 ctatgggagtgcaatcttccgtcgtccattgacaccagctcggttcgtacagaaagataa 14006 Query: 688 tatttacctgccgaaaaaaacagaccaggcagtctggtgctggcgtgaggctccccagaa 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14007 tatttacctgccgaaaaaaacagaccaggcagtctggtgctggcgtgaggctccccagaa 14066 Query: 748 ggtctaggcccacacagccaaaacgacttcttcgatcactttagtacgagagggcaggcc 807 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14067 ggtctaggcccacacagccaaaacgacttcttcgatcactttagtacgagagggcaggcc 14126 Query: 808 ccagtcccattagtttgtaactggtaactactattccaatcccgtcatcacgtatgcctt 867 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 14127 ccagtcccattagtttgtaactggtaactactattccaatcccgtcatcacgtatgcc-t 14185 Query: 868 tcggcaggtacatactaaatgatgagcttatgtttttttccgaaatctctttcttgaggt 927 |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 14186 tcggcaggtacatactaaatgatgagcttatgttttttcccgaaatctc-ttcttgaggt 14244 Query: 928 anaataacaagccattgtttcatgccctttgtttgtacgg 967 | |||||||||||||||||||||||| |||||||||||| Sbjct: 14245 agaataacaagccattgtttcatgcc--ttgtttgtacgg 14282 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5447 Number of Sequences: 1807 Number of extensions: 5447 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 967 length of database: 10,358,551 effective HSP length: 16 effective length of query: 951 effective length of database: 10,329,639 effective search space: 9823486689 effective search space used: 9823486689 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)