BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC15ZF09RM1.SCF screened BAC_end
         (945 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig613                                                         1051   0.0  

>3x_Contig613 
          Length = 1854

 Score = 1051 bits (530), Expect = 0.0
 Identities = 536/538 (99%)
 Strand = Plus / Plus

                                                                        
Query: 48   ctacttctggaacttagtttattttctaagaagatcagtcaatatcctacgttagccttt 107
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1317 ctacttctggaacttagtttaatttctaagaagatcagtcaatatcctacgttagccttt 1376

                                                                        
Query: 108  ttttttaacctaacattaaacctaaattaagatatagacttcaacatcaatgtcagccat 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1377 ttttttaacctaacattaaacctaaattaagatatagacttcaacatcaatgtcagccat 1436

                                                                        
Query: 168  gtattgaaactgcattcaccttttatacaaacggcggggagagataagaactagtaaact 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1437 gtattgaaactgcattcaccttttatacaaacggcggggagagataagaactagtaaact 1496

                                                                        
Query: 228  agtaaatttgttaaactacatacgatattgattcttcactaggctcatagaatggcttta 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1497 agtaaatttgttaaactacatacgatattgattcttcactaggctcatagaatggcttta 1556

                                                                        
Query: 288  acaccagaaatggagaggcaaaggaaaaaatgatgcaacacgaacaagataaaccgttgt 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1557 acaccagaaatggagaggcaaaggaaaaaatgatgcaacacgaacaagataaaccgttgt 1616

                                                                        
Query: 348  acaaaatcttgtaaatatctatgagttacgctataacttggtcaagatttccaataattg 407
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1617 acaacatcttgtaaatatctatgagttacgctataacttggtcaagatttccaataattg 1676

                                                                        
Query: 408  aagcacactatttttttaccatttcccaatagagagcctgataagaggttattcttttcc 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1677 aagcacactatttttttaccatttcccaatagagagcctgataagaggttattcttttcc 1736

                                                                        
Query: 468  aactgcgcattggaaaccgattaaatttcctctacaaacgaggtccattcgaattaagct 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1737 aactgcgcattggaaaccgattaaatttcctctacaaacgaggtccattcgaattaagct 1796

                                                                      
Query: 528  atcattttgcaattgctaagcggtgtctgtgctacgcttcacttctgttaagggtatc 585
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1797 atcattttgcaattgctaagcggtgtctgtgctacgcttcacttctgttaagggtatc 1854


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7180
Number of Sequences: 1807
Number of extensions: 7180
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 945
length of database: 10,358,551
effective HSP length: 16
effective length of query: 929
effective length of database: 10,329,639
effective search space: 9596234631
effective search space used: 9596234631
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)